Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.43■□□□□ 0.54
HCFC1P51610 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HCFC1P51610 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCFC1P51610 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HCFC1P51610 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HCFC1P51610 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.43■□□□□ 0.54
HCFC1P51610 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HCFC1P51610 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC1P51610 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC1P51610 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HCFC1P51610 AL355472.2-201ENST00000422958 438 ntBASIC18.42■□□□□ 0.54
HCFC1P51610 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC1P51610 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.42■□□□□ 0.54
HCFC1P51610 AC243732.1-201ENST00000612648 864 ntBASIC18.42■□□□□ 0.54
HCFC1P51610 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC1P51610 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC1P51610 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC1P51610 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCFC1P51610 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.42■□□□□ 0.54
HCFC1P51610 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HCFC1P51610 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.41■□□□□ 0.54
HCFC1P51610 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.41■□□□□ 0.54
HCFC1P51610 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.41■□□□□ 0.54
HCFC1P51610 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.41■□□□□ 0.54
HCFC1P51610 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC1P51610 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC1P51610 ESRRAP1-201ENST00000400596 1257 ntBASIC18.41■□□□□ 0.54
HCFC1P51610 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.41■□□□□ 0.54
HCFC1P51610 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC1P51610 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.41■□□□□ 0.54
HCFC1P51610 AC008403.3-201ENST00000598924 454 ntBASIC18.41■□□□□ 0.54
HCFC1P51610 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
HCFC1P51610 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC1P51610 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCFC1P51610 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.41■□□□□ 0.54
HCFC1P51610 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC1P51610 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.4■□□□□ 0.54
HCFC1P51610 AC026366.1-201ENST00000488803 879 ntBASIC18.4■□□□□ 0.54
HCFC1P51610 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.4■□□□□ 0.54
HCFC1P51610 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.4■□□□□ 0.54
HCFC1P51610 AP006294.2-201ENST00000641667 209 ntBASIC18.4■□□□□ 0.54
HCFC1P51610 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC1P51610 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC1P51610 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
HCFC1P51610 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HCFC1P51610 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HCFC1P51610 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC1P51610 AC087742.1-201ENST00000575880 1738 ntBASIC18.4■□□□□ 0.54
HCFC1P51610 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
HCFC1P51610 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.4■□□□□ 0.54
HCFC1P51610 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HCFC1P51610 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC1P51610 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HCFC1P51610 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC1P51610 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC1P51610 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCFC1P51610 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
HCFC1P51610 AC061975.6-201ENST00000579045 1553 ntBASIC18.4■□□□□ 0.54
HCFC1P51610 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HCFC1P51610 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.39■□□□□ 0.54
HCFC1P51610 AC139530.1-201ENST00000575312 1977 ntBASIC18.39■□□□□ 0.53
HCFC1P51610 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1P51610 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.39■□□□□ 0.53
HCFC1P51610 UNC93B4-201ENST00000505679 747 ntBASIC18.39■□□□□ 0.53
HCFC1P51610 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.39■□□□□ 0.53
HCFC1P51610 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.39■□□□□ 0.53
HCFC1P51610 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1P51610 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1P51610 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1P51610 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1P51610 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1P51610 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HCFC1P51610 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1P51610 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1P51610 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC1P51610 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.39■□□□□ 0.53
HCFC1P51610 AL591742.1-201ENST00000604433 565 ntBASIC18.39■□□□□ 0.53
HCFC1P51610 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HCFC1P51610 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HCFC1P51610 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1P51610 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1P51610 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1P51610 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.38■□□□□ 0.53
HCFC1P51610 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1P51610 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1P51610 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HCFC1P51610 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HCFC1P51610 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1P51610 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC1P51610 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.38■□□□□ 0.53
HCFC1P51610 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC1P51610 AC137767.1-201ENST00000602918 1920 ntBASIC18.37■□□□□ 0.53
HCFC1P51610 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC1P51610 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HCFC1P51610 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HCFC1P51610 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.37■□□□□ 0.53
HCFC1P51610 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms