Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 FBXW4P1-201ENST00000426721 2239 ntBASIC21.19■□□□□ 0.98
CSNK1DP48730 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 AC080038.1-201ENST00000611274 1154 ntBASIC21.19■□□□□ 0.98
CSNK1DP48730 AC243732.1-201ENST00000612648 864 ntBASIC21.19■□□□□ 0.98
CSNK1DP48730 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.19■□□□□ 0.98
CSNK1DP48730 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSNK1DP48730 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CSNK1DP48730 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 DUX4L16-201ENST00000555130 1264 ntBASIC21.18■□□□□ 0.98
CSNK1DP48730 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CSNK1DP48730 AC010536.3-201ENST00000620306 533 ntBASIC21.18■□□□□ 0.98
CSNK1DP48730 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CSNK1DP48730 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSNK1DP48730 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.18■□□□□ 0.98
CSNK1DP48730 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CSNK1DP48730 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1DP48730 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1DP48730 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1DP48730 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1DP48730 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1DP48730 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.17■□□□□ 0.98
CSNK1DP48730 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.17■□□□□ 0.98
CSNK1DP48730 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.17■□□□□ 0.98
CSNK1DP48730 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CSNK1DP48730 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
CSNK1DP48730 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.17■□□□□ 0.98
CSNK1DP48730 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.17■□□□□ 0.98
CSNK1DP48730 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.17■□□□□ 0.98
CSNK1DP48730 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.17■□□□□ 0.98
CSNK1DP48730 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1DP48730 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1DP48730 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1DP48730 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CSNK1DP48730 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSNK1DP48730 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.16■□□□□ 0.98
CSNK1DP48730 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.16■□□□□ 0.98
CSNK1DP48730 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.16■□□□□ 0.98
CSNK1DP48730 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 TERF1P5-201ENST00000477545 1207 ntBASIC21.16■□□□□ 0.98
CSNK1DP48730 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CSNK1DP48730 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1DP48730 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1DP48730 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1DP48730 RBM17P2-201ENST00000616397 1405 ntBASIC21.15■□□□□ 0.98
CSNK1DP48730 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1DP48730 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.15■□□□□ 0.98
CSNK1DP48730 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1DP48730 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.15■□□□□ 0.98
CSNK1DP48730 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.15■□□□□ 0.98
CSNK1DP48730 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.15■□□□□ 0.98
CSNK1DP48730 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.15■□□□□ 0.98
CSNK1DP48730 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1DP48730 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1DP48730 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1DP48730 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1DP48730 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.14■□□□□ 0.98
CSNK1DP48730 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CSNK1DP48730 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
CSNK1DP48730 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.14■□□□□ 0.98
CSNK1DP48730 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CSNK1DP48730 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
CSNK1DP48730 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.14■□□□□ 0.97
CSNK1DP48730 CDCA4P2-201ENST00000441182 718 ntBASIC21.14■□□□□ 0.97
CSNK1DP48730 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CSNK1DP48730 AC231657.2-201ENST00000624556 255 ntBASIC21.14■□□□□ 0.97
CSNK1DP48730 AC073111.5-205ENST00000641717 521 ntBASIC21.14■□□□□ 0.97
CSNK1DP48730 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.14■□□□□ 0.97
CSNK1DP48730 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.14■□□□□ 0.97
CSNK1DP48730 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.13■□□□□ 0.97
CSNK1DP48730 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CSNK1DP48730 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.13■□□□□ 0.97
CSNK1DP48730 AC007322.4-201ENST00000509611 723 ntBASIC21.13■□□□□ 0.97
CSNK1DP48730 RAP2CP1-201ENST00000605103 478 ntBASIC21.13■□□□□ 0.97
CSNK1DP48730 RARRES2P11-201ENST00000635158 484 ntBASIC21.13■□□□□ 0.97
CSNK1DP48730 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms