Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 VPS38YLR360W 1320 nt3.39□□□□□ -1.87
UPF3P48412 ARP5YNL059C 2268 nt3.39□□□□□ -1.87
UPF3P48412 FLO9YAL063C 3969 nt3.38□□□□□ -1.87
UPF3P48412 SMC3YJL074C 3693 nt3.38□□□□□ -1.87
UPF3P48412 YGR027W-BYGR027W-B 5268 nt3.38□□□□□ -1.87
UPF3P48412 YLR227W-BYLR227W-B 5268 nt3.38□□□□□ -1.87
UPF3P48412 YPR158C-DYPR158C-D 5268 nt3.38□□□□□ -1.87
UPF3P48412 FUS2YMR232W 2034 nt3.38□□□□□ -1.87
UPF3P48412 AUS1YOR011W 4185 nt3.38□□□□□ -1.87
UPF3P48412 AAD3YCR107W 1092 nt3.38□□□□□ -1.87
UPF3P48412 FAP7YDL166C 594 nt3.38□□□□□ -1.87
UPF3P48412 RPA14YDR156W 414 nt3.38□□□□□ -1.87
UPF3P48412 EFG1YGR271C-A 702 nt3.38□□□□□ -1.87
UPF3P48412 YHL026CYHL026C 948 nt3.38□□□□□ -1.87
UPF3P48412 YHR180WYHR180W 492 nt3.38□□□□□ -1.87
UPF3P48412 YKL069WYKL069W 543 nt3.38□□□□□ -1.87
UPF3P48412 SUB1YMR039C 879 nt3.38□□□□□ -1.87
UPF3P48412 BNI4YNL233W 2679 nt3.38□□□□□ -1.87
UPF3P48412 RTT109YLL002W 1311 nt3.38□□□□□ -1.87
UPF3P48412 KHA1YJL094C 2622 nt3.38□□□□□ -1.87
UPF3P48412 ENA5YDR038C 3276 nt3.38□□□□□ -1.87
UPF3P48412 ENA2YDR039C 3276 nt3.38□□□□□ -1.87
UPF3P48412 ENA1YDR040C 3276 nt3.38□□□□□ -1.87
UPF3P48412 EMP70YLR083C 2004 nt3.37□□□□□ -1.87
UPF3P48412 HOP1YIL072W 1818 nt3.37□□□□□ -1.87
UPF3P48412 AI2Q0055 2565 nt3.37□□□□□ -1.87
UPF3P48412 NUR1YDL089W 1455 nt3.37□□□□□ -1.87
UPF3P48412 YDL071CYDL071C 375 nt3.37□□□□□ -1.87
UPF3P48412 AGE2YIL044C 897 nt3.37□□□□□ -1.87
UPF3P48412 TPK3YKL166C 1197 nt3.37□□□□□ -1.87
UPF3P48412 TVP18YMR071C 504 nt3.37□□□□□ -1.87
UPF3P48412 TRS120YDR407C 3870 nt3.37□□□□□ -1.87
UPF3P48412 TOM70YNL121C 1854 nt3.37□□□□□ -1.87
UPF3P48412 PDS5YMR076C 3834 nt3.36□□□□□ -1.87
UPF3P48412 GCN1YGL195W 8019 nt3.36□□□□□ -1.87
UPF3P48412 VAB2YEL005C 849 nt3.36□□□□□ -1.87
UPF3P48412 RPB9YGL070C 369 nt3.36□□□□□ -1.87
UPF3P48412 YJL169WYJL169W 369 nt3.36□□□□□ -1.87
UPF3P48412 LSM8YJR022W 330 nt3.36□□□□□ -1.87
UPF3P48412 RAD14YMR201C 1116 nt3.36□□□□□ -1.87
UPF3P48412 RUF5-1RUF5-1 710 nt3.36□□□□□ -1.87
UPF3P48412 RUF5-2RUF5-2 710 nt3.36□□□□□ -1.87
UPF3P48412 PEX27YOR193W 1131 nt3.36□□□□□ -1.87
UPF3P48412 SAS5YOR213C 747 nt3.36□□□□□ -1.87
UPF3P48412 YDR210W-BYDR210W-B 5313 nt3.36□□□□□ -1.87
UPF3P48412 YDR261W-BYDR261W-B 5313 nt3.36□□□□□ -1.87
UPF3P48412 YFL002W-AYFL002W-A 5313 nt3.36□□□□□ -1.87
UPF3P48412 YGR161W-BYGR161W-B 5313 nt3.36□□□□□ -1.87
UPF3P48412 YLR410W-BYLR410W-B 5313 nt3.36□□□□□ -1.87
UPF3P48412 YCL019WYCL019W 5313 nt3.36□□□□□ -1.87
UPF3P48412 EXO84YBR102C 2262 nt3.36□□□□□ -1.87
UPF3P48412 YAT2YER024W 2772 nt3.35□□□□□ -1.87
UPF3P48412 YMR018WYMR018W 1545 nt3.35□□□□□ -1.87
UPF3P48412 SLA1YBL007C 3735 nt3.35□□□□□ -1.87
UPF3P48412 PSF1YDR013W 627 nt3.35□□□□□ -1.87
UPF3P48412 STE2YFL026W 1296 nt3.35□□□□□ -1.87
UPF3P48412 DSE2YHR143W 978 nt3.35□□□□□ -1.87
UPF3P48412 YKL070WYKL070W 510 nt3.35□□□□□ -1.87
UPF3P48412 ENV10YLR065C 546 nt3.35□□□□□ -1.87
UPF3P48412 PRM6YML047C 1059 nt3.35□□□□□ -1.87
UPF3P48412 PDR17YNL264C 1053 nt3.35□□□□□ -1.87
UPF3P48412 RFC3YNL290W 1023 nt3.35□□□□□ -1.87
UPF3P48412 SME1YOR159C 285 nt3.35□□□□□ -1.87
UPF3P48412 RXT2YBR095C 1293 nt3.35□□□□□ -1.87
UPF3P48412 RIM13YMR154C 2184 nt3.35□□□□□ -1.87
UPF3P48412 STE23YLR389C 3084 nt3.35□□□□□ -1.87
UPF3P48412 STT4YLR305C 5703 nt3.34□□□□□ -1.87
UPF3P48412 YCR099CYCR099C 468 nt3.34□□□□□ -1.87
UPF3P48412 CPR5YDR304C 678 nt3.34□□□□□ -1.87
UPF3P48412 YFL015CYFL015C 495 nt3.34□□□□□ -1.87
UPF3P48412 YFL065CYFL065C 309 nt3.34□□□□□ -1.87
UPF3P48412 YLR257WYLR257W 966 nt3.34□□□□□ -1.87
UPF3P48412 SSN8YNL025C 972 nt3.34□□□□□ -1.87
UPF3P48412 YAK1YJL141C 2424 nt3.34□□□□□ -1.87
UPF3P48412 URB2YJR041C 3525 nt3.34□□□□□ -1.87
UPF3P48412 RAD18YCR066W 1464 nt3.34□□□□□ -1.88
UPF3P48412 RSC1YGR056W 2787 nt3.34□□□□□ -1.88
UPF3P48412 SMC2YFR031C 3513 nt3.33□□□□□ -1.88
UPF3P48412 CIK1YMR198W 1785 nt3.33□□□□□ -1.88
UPF3P48412 RAV2YDR202C 1056 nt3.33□□□□□ -1.88
UPF3P48412 YGL109WYGL109W 324 nt3.33□□□□□ -1.88
UPF3P48412 TAD1YGL243W 1203 nt3.33□□□□□ -1.88
UPF3P48412 LIN1YHR156C 1023 nt3.33□□□□□ -1.88
UPF3P48412 ATG27YJL178C 816 nt3.33□□□□□ -1.88
UPF3P48412 YLR154C-HYLR154C-H 132 nt3.33□□□□□ -1.88
UPF3P48412 YLR156C-AYLR156C-A 132 nt3.33□□□□□ -1.88
UPF3P48412 YLR157C-CYLR157C-C 132 nt3.33□□□□□ -1.88
UPF3P48412 YLR159C-AYLR159C-A 132 nt3.33□□□□□ -1.88
UPF3P48412 YKE2YLR200W 345 nt3.33□□□□□ -1.88
UPF3P48412 RAD33YML011C 534 nt3.33□□□□□ -1.88
UPF3P48412 DYN3YMR299C 939 nt3.33□□□□□ -1.88
UPF3P48412 ATP20YPR020W 348 nt3.33□□□□□ -1.88
UPF3P48412 NSA1YGL111W 1392 nt3.33□□□□□ -1.88
UPF3P48412 DUF1YOL087C 3351 nt3.33□□□□□ -1.88
UPF3P48412 ANR2YKL047W 1551 nt3.33□□□□□ -1.88
UPF3P48412 STP2YHR006W 1626 nt3.33□□□□□ -1.88
UPF3P48412 PKH1YDR490C 2301 nt3.32□□□□□ -1.88
UPF3P48412 EMI1YDR512C 564 nt3.32□□□□□ -1.88
UPF3P48412 YEL050W-AYEL050W-A 192 nt3.32□□□□□ -1.88
UPF3P48412 NSA2YER126C 786 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms