Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 MED2YDL005C 1296 nt1.67□□□□□ -2.14
VPS55P47111 BRP1YGL007W 378 nt1.67□□□□□ -2.14
VPS55P47111 PCL7YIL050W 858 nt1.67□□□□□ -2.14
VPS55P47111 VMA5YKL080W 1179 nt1.67□□□□□ -2.14
VPS55P47111 BRE1YDL074C 2103 nt1.67□□□□□ -2.14
VPS55P47111 YIL080WYIL080W 4722 nt1.67□□□□□ -2.14
VPS55P47111 TPO5YKL174C 1857 nt1.67□□□□□ -2.14
VPS55P47111 YCG1YDR325W 3108 nt1.66□□□□□ -2.14
VPS55P47111 PRP18YGR006W 756 nt1.66□□□□□ -2.14
VPS55P47111 TCD1YHR003C 1290 nt1.66□□□□□ -2.14
VPS55P47111 YHR052W-AYHR052W-A 195 nt1.66□□□□□ -2.14
VPS55P47111 YHR054W-AYHR054W-A 195 nt1.66□□□□□ -2.14
VPS55P47111 YJL028WYJL028W 336 nt1.66□□□□□ -2.14
VPS55P47111 RPS1AYLR441C 768 nt1.66□□□□□ -2.14
VPS55P47111 ICY1YMR195W 384 nt1.66□□□□□ -2.14
VPS55P47111 YNL184CYNL184C 327 nt1.66□□□□□ -2.14
VPS55P47111 YOL107WYOL107W 1029 nt1.66□□□□□ -2.14
VPS55P47111 RPL25YOL127W 429 nt1.66□□□□□ -2.14
VPS55P47111 SGT1YOR057W 1188 nt1.66□□□□□ -2.14
VPS55P47111 RBL2YOR265W 321 nt1.66□□□□□ -2.14
VPS55P47111 ISU1YPL135W 498 nt1.66□□□□□ -2.14
VPS55P47111 KRE33YNL132W 3171 nt1.66□□□□□ -2.14
VPS55P47111 REV3YPL167C 4515 nt1.65□□□□□ -2.14
VPS55P47111 AI2Q0055 2565 nt1.65□□□□□ -2.14
VPS55P47111 IRC20YLR247C 4671 nt1.65□□□□□ -2.14
VPS55P47111 CTM1YHR109W 1758 nt1.65□□□□□ -2.14
VPS55P47111 YKL100CYKL100C 1764 nt1.65□□□□□ -2.14
VPS55P47111 YGL159WYGL159W 1113 nt1.65□□□□□ -2.15
VPS55P47111 CIR1YGR207C 786 nt1.65□□□□□ -2.15
VPS55P47111 YIL102C-AYIL102C-A 228 nt1.65□□□□□ -2.15
VPS55P47111 TTI2YJR136C 1266 nt1.65□□□□□ -2.15
VPS55P47111 DAD2YKR083C 402 nt1.65□□□□□ -2.15
VPS55P47111 YLR076CYLR076C 423 nt1.65□□□□□ -2.15
VPS55P47111 CCW14YLR390W-A 717 nt1.65□□□□□ -2.15
VPS55P47111 REG2YBR050C 1017 nt1.65□□□□□ -2.15
VPS55P47111 YBR096WYBR096W 693 nt1.65□□□□□ -2.15
VPS55P47111 CNS1YBR155W 1158 nt1.65□□□□□ -2.15
VPS55P47111 SHG1YBR258C 429 nt1.65□□□□□ -2.15
VPS55P47111 CLN2YPL256C 1638 nt1.65□□□□□ -2.15
VPS55P47111 AVT2YEL064C 1443 nt1.65□□□□□ -2.15
VPS55P47111 SCH9YHR205W 2475 nt1.64□□□□□ -2.15
VPS55P47111 VHR1YIL056W 1923 nt1.64□□□□□ -2.15
VPS55P47111 UBX3YDL091C 1368 nt1.64□□□□□ -2.15
VPS55P47111 HRD3YLR207W 2502 nt1.64□□□□□ -2.15
VPS55P47111 TAE2YPL009C 3117 nt1.64□□□□□ -2.15
VPS55P47111 GRX3YDR098C 858 nt1.64□□□□□ -2.15
VPS55P47111 ERV14YGL054C 417 nt1.64□□□□□ -2.15
VPS55P47111 EMP24YGL200C 612 nt1.64□□□□□ -2.15
VPS55P47111 YLL044WYLL044W 447 nt1.64□□□□□ -2.15
VPS55P47111 RMP1YLR145W 606 nt1.64□□□□□ -2.15
VPS55P47111 YPL142CYPL142C 318 nt1.64□□□□□ -2.15
VPS55P47111 CBP6YBR120C 489 nt1.64□□□□□ -2.15
VPS55P47111 SSQ1YLR369W 1974 nt1.64□□□□□ -2.15
VPS55P47111 YMR045CYMR045C 5268 nt1.64□□□□□ -2.15
VPS55P47111 UBP1YDL122W 2430 nt1.64□□□□□ -2.15
VPS55P47111 ECM18YDR125C 1362 nt1.63□□□□□ -2.15
VPS55P47111 VEL1YGL258W 621 nt1.63□□□□□ -2.15
VPS55P47111 RRF1YHR038W 693 nt1.63□□□□□ -2.15
VPS55P47111 YUH1YJR099W 711 nt1.63□□□□□ -2.15
VPS55P47111 RSA3YLR221C 663 nt1.63□□□□□ -2.15
VPS55P47111 FPR1YNL135C 345 nt1.63□□□□□ -2.15
VPS55P47111 RSA1YPL193W 1146 nt1.63□□□□□ -2.15
VPS55P47111 ALG5YPL227C 1005 nt1.63□□□□□ -2.15
VPS55P47111 MBA1YBR185C 837 nt1.63□□□□□ -2.15
VPS55P47111 YCL023CYCL023C 348 nt1.63□□□□□ -2.15
VPS55P47111 GYP5YPL249C 2685 nt1.63□□□□□ -2.15
VPS55P47111 SSY1YDR160W 2559 nt1.62□□□□□ -2.15
VPS55P47111 KHA1YJL094C 2622 nt1.62□□□□□ -2.15
VPS55P47111 UFD4YKL010C 4452 nt1.62□□□□□ -2.15
VPS55P47111 YCR007CYCR007C 720 nt1.62□□□□□ -2.15
VPS55P47111 YER066C-AYER066C-A 501 nt1.62□□□□□ -2.15
VPS55P47111 BAT1YHR208W 1182 nt1.62□□□□□ -2.15
VPS55P47111 ARC19YKL013C 516 nt1.62□□□□□ -2.15
VPS55P47111 TAF4YMR005W 1167 nt1.62□□□□□ -2.15
VPS55P47111 YNL043CYNL043C 321 nt1.62□□□□□ -2.15
VPS55P47111 THI80YOR143C 960 nt1.62□□□□□ -2.15
VPS55P47111 SYC1YOR179C 567 nt1.62□□□□□ -2.15
VPS55P47111 SSN2YDR443C 4263 nt1.62□□□□□ -2.15
VPS55P47111 GYL1YMR192W 2163 nt1.62□□□□□ -2.15
VPS55P47111 YRR1YOR162C 2433 nt1.61□□□□□ -2.15
VPS55P47111 UBP2YOR124C 3819 nt1.61□□□□□ -2.15
VPS55P47111 BNI4YNL233W 2679 nt1.61□□□□□ -2.15
VPS55P47111 ART10YLR392C 1557 nt1.61□□□□□ -2.15
VPS55P47111 YDR340WYDR340W 303 nt1.61□□□□□ -2.15
VPS55P47111 OTU2YHL013C 924 nt1.61□□□□□ -2.15
VPS55P47111 AIM19YIL087C 474 nt1.61□□□□□ -2.15
VPS55P47111 RPS29AYLR388W 171 nt1.61□□□□□ -2.15
VPS55P47111 HSP10YOR020C 321 nt1.61□□□□□ -2.15
VPS55P47111 RRG7YOR305W 729 nt1.61□□□□□ -2.15
VPS55P47111 GIS1YDR096W 2685 nt1.61□□□□□ -2.15
VPS55P47111 MPC54YOR177C 1395 nt1.6□□□□□ -2.15
VPS55P47111 AMS1YGL156W 3252 nt1.6□□□□□ -2.15
VPS55P47111 FKS1YLR342W 5631 nt1.6□□□□□ -2.15
VPS55P47111 KSP1YHR082C 3090 nt1.6□□□□□ -2.15
VPS55P47111 YRB1YDR002W 606 nt1.6□□□□□ -2.15
VPS55P47111 YGR039WYGR039W 312 nt1.6□□□□□ -2.15
VPS55P47111 YHR071C-AYHR071C-A 321 nt1.6□□□□□ -2.15
VPS55P47111 YKL156C-AYKL156C-A 117 nt1.6□□□□□ -2.15
VPS55P47111 MRPL38YKL170W 417 nt1.6□□□□□ -2.15
VPS55P47111 TSR4YOL022C 1227 nt1.6□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms