Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 CST9YLR394W 1449 nt3.24□□□□□ -1.89
LSM5P40089 MUB1YMR100W 1863 nt3.24□□□□□ -1.89
LSM5P40089 HSE1YHL002W 1359 nt3.24□□□□□ -1.89
LSM5P40089 STT4YLR305C 5703 nt3.24□□□□□ -1.89
LSM5P40089 DIA2YOR080W 2199 nt3.24□□□□□ -1.89
LSM5P40089 SSM4YIL030C 3960 nt3.23□□□□□ -1.89
LSM5P40089 SRP1YNL189W 1629 nt3.23□□□□□ -1.89
LSM5P40089 NSA2YER126C 786 nt3.23□□□□□ -1.89
LSM5P40089 COX6YHR051W 447 nt3.23□□□□□ -1.89
LSM5P40089 YHR212CYHR212C 336 nt3.23□□□□□ -1.89
LSM5P40089 YIR040CYIR040C 333 nt3.23□□□□□ -1.89
LSM5P40089 CTK2YJL006C 972 nt3.23□□□□□ -1.89
LSM5P40089 YAR060CYAR060C 336 nt3.23□□□□□ -1.89
LSM5P40089 RPB8YOR224C 441 nt3.23□□□□□ -1.89
LSM5P40089 GLC3YEL011W 2115 nt3.23□□□□□ -1.89
LSM5P40089 TRS120YDR407C 3870 nt3.22□□□□□ -1.89
LSM5P40089 SAG1YJR004C 1953 nt3.22□□□□□ -1.89
LSM5P40089 KHA1YJL094C 2622 nt3.22□□□□□ -1.89
LSM5P40089 ATC1YDR184C 885 nt3.22□□□□□ -1.89
LSM5P40089 YDR193WYDR193W 399 nt3.22□□□□□ -1.89
LSM5P40089 AGE2YIL044C 897 nt3.22□□□□□ -1.89
LSM5P40089 YIL141WYIL141W 390 nt3.22□□□□□ -1.89
LSM5P40089 ERG20YJL167W 1059 nt3.22□□□□□ -1.89
LSM5P40089 YJL169WYJL169W 369 nt3.22□□□□□ -1.89
LSM5P40089 YAL066WYAL066W 309 nt3.22□□□□□ -1.89
LSM5P40089 ILV5YLR355C 1188 nt3.22□□□□□ -1.89
LSM5P40089 MPD2YOL088C 834 nt3.22□□□□□ -1.89
LSM5P40089 SFG1YOR315W 1041 nt3.22□□□□□ -1.89
LSM5P40089 DIM1YPL266W 957 nt3.22□□□□□ -1.89
LSM5P40089 YBR090CYBR090C 369 nt3.22□□□□□ -1.89
LSM5P40089 YGL176CYGL176C 1665 nt3.22□□□□□ -1.89
LSM5P40089 AUS1YOR011W 4185 nt3.22□□□□□ -1.89
LSM5P40089 SKO1YNL167C 1944 nt3.21□□□□□ -1.9
LSM5P40089 NOP56YLR197W 1515 nt3.21□□□□□ -1.9
LSM5P40089 MET5YJR137C 4329 nt3.21□□□□□ -1.9
LSM5P40089 YCR100CYCR100C 951 nt3.21□□□□□ -1.9
LSM5P40089 PAU10YDR542W 363 nt3.21□□□□□ -1.9
LSM5P40089 PAU11YGL261C 363 nt3.21□□□□□ -1.9
LSM5P40089 MRPL9YGR220C 810 nt3.21□□□□□ -1.9
LSM5P40089 YKL115CYKL115C 393 nt3.21□□□□□ -1.9
LSM5P40089 PIR1YKL164C 1026 nt3.21□□□□□ -1.9
LSM5P40089 YLR169WYLR169W 354 nt3.21□□□□□ -1.9
LSM5P40089 RPS30AYLR287C-A 192 nt3.21□□□□□ -1.9
LSM5P40089 PAU4YLR461W 363 nt3.21□□□□□ -1.9
LSM5P40089 RAD33YML011C 534 nt3.21□□□□□ -1.9
LSM5P40089 RFC5YBR087W 1065 nt3.21□□□□□ -1.9
LSM5P40089 YCK2YNL154C 1641 nt3.21□□□□□ -1.9
LSM5P40089 SSE2YBR169C 2082 nt3.21□□□□□ -1.9
LSM5P40089 UTP5YDR398W 1932 nt3.21□□□□□ -1.9
LSM5P40089 GCN1YGL195W 8019 nt3.2□□□□□ -1.9
LSM5P40089 ESA1YOR244W 1338 nt3.2□□□□□ -1.9
LSM5P40089 NGG1YDR176W 2109 nt3.2□□□□□ -1.9
LSM5P40089 HMO1YDR174W 741 nt3.2□□□□□ -1.9
LSM5P40089 HTB1YDR224C 396 nt3.2□□□□□ -1.9
LSM5P40089 RSM27YGR215W 333 nt3.2□□□□□ -1.9
LSM5P40089 YHL002C-AYHL002C-A 489 nt3.2□□□□□ -1.9
LSM5P40089 YKL070WYKL070W 510 nt3.2□□□□□ -1.9
LSM5P40089 ATG10YLL042C 504 nt3.2□□□□□ -1.9
LSM5P40089 YLR366WYLR366W 306 nt3.2□□□□□ -1.9
LSM5P40089 PRM6YML047C 1059 nt3.2□□□□□ -1.9
LSM5P40089 YNL203CYNL203C 612 nt3.2□□□□□ -1.9
LSM5P40089 SWD3YBR175W 948 nt3.2□□□□□ -1.9
LSM5P40089 HOP1YIL072W 1818 nt3.2□□□□□ -1.9
LSM5P40089 YHR080CYHR080C 4038 nt3.2□□□□□ -1.9
LSM5P40089 SFH1YLR321C 1281 nt3.19□□□□□ -1.9
LSM5P40089 RPL19BYBL027W 570 nt3.19□□□□□ -1.9
LSM5P40089 GOT1YMR292W 417 nt3.19□□□□□ -1.9
LSM5P40089 CMD1YBR109C 444 nt3.19□□□□□ -1.9
LSM5P40089 SWI1YPL016W 3945 nt3.19□□□□□ -1.9
LSM5P40089 PFK26YIL107C 2484 nt3.19□□□□□ -1.9
LSM5P40089 REC8YPR007C 2043 nt3.19□□□□□ -1.9
LSM5P40089 URB2YJR041C 3525 nt3.18□□□□□ -1.9
LSM5P40089 PUG1YER185W 912 nt3.18□□□□□ -1.9
LSM5P40089 DSE2YHR143W 978 nt3.18□□□□□ -1.9
LSM5P40089 RPS21BYJL136C 264 nt3.18□□□□□ -1.9
LSM5P40089 PDR17YNL264C 1053 nt3.18□□□□□ -1.9
LSM5P40089 YOR073W-AYOR073W-A 234 nt3.18□□□□□ -1.9
LSM5P40089 NIP7YPL211W 546 nt3.18□□□□□ -1.9
LSM5P40089 PDC2YDR081C 2778 nt3.18□□□□□ -1.9
LSM5P40089 YKL100CYKL100C 1764 nt3.17□□□□□ -1.9
LSM5P40089 PDS5YMR076C 3834 nt3.17□□□□□ -1.9
LSM5P40089 tC(GCA)BtC(GCA)B 72 nt3.17□□□□□ -1.9
LSM5P40089 tC(GCA)GtC(GCA)G 72 nt3.17□□□□□ -1.9
LSM5P40089 tC(GCA)P1tC(GCA)P1 72 nt3.17□□□□□ -1.9
LSM5P40089 tC(GCA)P2tC(GCA)P2 72 nt3.17□□□□□ -1.9
LSM5P40089 YER165C-AYER165C-A 357 nt3.17□□□□□ -1.9
LSM5P40089 GOS1YHL031C 672 nt3.17□□□□□ -1.9
LSM5P40089 YNL089CYNL089C 477 nt3.17□□□□□ -1.9
LSM5P40089 RPC40YPR110C 1008 nt3.17□□□□□ -1.9
LSM5P40089 ARL1YBR164C 552 nt3.17□□□□□ -1.9
LSM5P40089 PSK1YAL017W 4071 nt3.17□□□□□ -1.9
LSM5P40089 STU2YLR045C 2667 nt3.16□□□□□ -1.9
LSM5P40089 PKH1YDR490C 2301 nt3.16□□□□□ -1.9
LSM5P40089 ICR1ICR1 3199 nt3.16□□□□□ -1.9
LSM5P40089 DTD1YDL219W 453 nt3.16□□□□□ -1.9
LSM5P40089 CPR5YDR304C 678 nt3.16□□□□□ -1.9
LSM5P40089 YGL159WYGL159W 1113 nt3.16□□□□□ -1.9
LSM5P40089 LST7YGR057C 729 nt3.16□□□□□ -1.9
LSM5P40089 YHL048C-AYHL048C-A 135 nt3.16□□□□□ -1.9
LSM5P40089 YHR180WYHR180W 492 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms