Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.93■□□□□ 0.78
RPL3P39023 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPL3P39023 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPL3P39023 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPL3P39023 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RPL3P39023 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.92■□□□□ 0.78
RPL3P39023 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPL3P39023 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPL3P39023 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.92■□□□□ 0.78
RPL3P39023 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.92■□□□□ 0.78
RPL3P39023 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.92■□□□□ 0.78
RPL3P39023 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.92■□□□□ 0.78
RPL3P39023 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.92■□□□□ 0.78
RPL3P39023 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.92■□□□□ 0.78
RPL3P39023 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.92■□□□□ 0.78
RPL3P39023 AL136967.2-201ENST00000623968 743 ntBASIC19.92■□□□□ 0.78
RPL3P39023 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPL3P39023 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.92■□□□□ 0.78
RPL3P39023 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.92■□□□□ 0.78
RPL3P39023 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPL3P39023 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.92■□□□□ 0.78
RPL3P39023 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPL3P39023 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.91■□□□□ 0.78
RPL3P39023 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPL3P39023 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPL3P39023 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPL3P39023 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.91■□□□□ 0.78
RPL3P39023 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.91■□□□□ 0.78
RPL3P39023 AC012414.1-201ENST00000556676 535 ntBASIC19.91■□□□□ 0.78
RPL3P39023 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.91■□□□□ 0.78
RPL3P39023 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
RPL3P39023 AL354811.1-201ENST00000610286 706 ntBASIC19.91■□□□□ 0.78
RPL3P39023 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPL3P39023 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.91■□□□□ 0.78
RPL3P39023 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.91■□□□□ 0.78
RPL3P39023 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.91■□□□□ 0.78
RPL3P39023 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPL3P39023 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPL3P39023 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.91■□□□□ 0.78
RPL3P39023 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RPL3P39023 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPL3P39023 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RPL3P39023 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.9■□□□□ 0.78
RPL3P39023 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RPL3P39023 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.9■□□□□ 0.78
RPL3P39023 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.9■□□□□ 0.78
RPL3P39023 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.9■□□□□ 0.78
RPL3P39023 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.9■□□□□ 0.78
RPL3P39023 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RPL3P39023 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.9■□□□□ 0.78
RPL3P39023 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
RPL3P39023 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
RPL3P39023 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.9■□□□□ 0.78
RPL3P39023 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL3P39023 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
RPL3P39023 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL3P39023 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPL3P39023 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPL3P39023 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RPL3P39023 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL3P39023 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.89■□□□□ 0.77
RPL3P39023 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL3P39023 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL3P39023 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL3P39023 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.89■□□□□ 0.77
RPL3P39023 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.89■□□□□ 0.77
RPL3P39023 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.89■□□□□ 0.77
RPL3P39023 AL031432.3-201ENST00000607698 485 ntBASIC19.89■□□□□ 0.77
RPL3P39023 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL3P39023 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RPL3P39023 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.88■□□□□ 0.77
RPL3P39023 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 AL139246.5-201ENST00000606645 996 ntBASIC19.88■□□□□ 0.77
RPL3P39023 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.88■□□□□ 0.77
RPL3P39023 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPL3P39023 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RPL3P39023 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPL3P39023 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms