Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 BSC2YDR275W 708 nt1.83□□□□□ -2.12
RPB11P38902 TIF35YDR429C 825 nt1.83□□□□□ -2.12
RPB11P38902 SCL1YGL011C 759 nt1.83□□□□□ -2.12
RPB11P38902 YHR032W-AYHR032W-A 180 nt1.83□□□□□ -2.12
RPB11P38902 PCL7YIL050W 858 nt1.83□□□□□ -2.12
RPB11P38902 GTT1YIR038C 705 nt1.83□□□□□ -2.12
RPB11P38902 EBP2YKL172W 1284 nt1.83□□□□□ -2.12
RPB11P38902 YAL059C-AYAL059C-A 423 nt1.83□□□□□ -2.12
RPB11P38902 NNT1YLR285W 786 nt1.83□□□□□ -2.12
RPB11P38902 YOR097CYOR097C 528 nt1.83□□□□□ -2.12
RPB11P38902 21S_rRNA21S_rRNA 3296 nt1.83□□□□□ -2.12
RPB11P38902 PBI1YPL272C 1554 nt1.83□□□□□ -2.12
RPB11P38902 PHO91YNR013C 2685 nt1.83□□□□□ -2.12
RPB11P38902 AEP3YPL005W 1821 nt1.82□□□□□ -2.12
RPB11P38902 MSH4YFL003C 2637 nt1.82□□□□□ -2.12
RPB11P38902 CTK1YKL139W 1587 nt1.82□□□□□ -2.12
RPB11P38902 YOS1YER074W-A 258 nt1.82□□□□□ -2.12
RPB11P38902 PAU23YLR037C 375 nt1.82□□□□□ -2.12
RPB11P38902 BOS1YLR078C 735 nt1.82□□□□□ -2.12
RPB11P38902 ATG34YOL083W 1239 nt1.82□□□□□ -2.12
RPB11P38902 FRE8YLR047C 2061 nt1.82□□□□□ -2.12
RPB11P38902 PUS9YDL036C 1389 nt1.82□□□□□ -2.12
RPB11P38902 YDR179W-AYDR179W-A 1392 nt1.82□□□□□ -2.12
RPB11P38902 YNL018CYNL018C 1839 nt1.82□□□□□ -2.12
RPB11P38902 FKS1YLR342W 5631 nt1.82□□□□□ -2.12
RPB11P38902 YRR1YOR162C 2433 nt1.81□□□□□ -2.12
RPB11P38902 ANR2YKL047W 1551 nt1.81□□□□□ -2.12
RPB11P38902 SGS1YMR190C 4344 nt1.81□□□□□ -2.12
RPB11P38902 MED2YDL005C 1296 nt1.81□□□□□ -2.12
RPB11P38902 HMO1YDR174W 741 nt1.81□□□□□ -2.12
RPB11P38902 RTT105YER104W 627 nt1.81□□□□□ -2.12
RPB11P38902 ERV1YGR029W 570 nt1.81□□□□□ -2.12
RPB11P38902 LSM8YJR022W 330 nt1.81□□□□□ -2.12
RPB11P38902 CDC123YLR215C 1083 nt1.81□□□□□ -2.12
RPB11P38902 HMT1YBR034C 1047 nt1.81□□□□□ -2.12
RPB11P38902 RAV1YJR033C 4074 nt1.81□□□□□ -2.12
RPB11P38902 UBX3YDL091C 1368 nt1.81□□□□□ -2.12
RPB11P38902 ROY1YMR258C 1662 nt1.8□□□□□ -2.12
RPB11P38902 CWH41YGL027C 2502 nt1.8□□□□□ -2.12
RPB11P38902 MSB1YOR188W 3414 nt1.8□□□□□ -2.12
RPB11P38902 PHO92YDR374C 921 nt1.8□□□□□ -2.12
RPB11P38902 YGR050CYGR050C 357 nt1.8□□□□□ -2.12
RPB11P38902 YGR168CYGR168C 1131 nt1.8□□□□□ -2.12
RPB11P38902 YAL042C-AYAL042C-A 378 nt1.8□□□□□ -2.12
RPB11P38902 SDO1YLR022C 753 nt1.8□□□□□ -2.12
RPB11P38902 SUB1YMR039C 879 nt1.8□□□□□ -2.12
RPB11P38902 YOR314WYOR314W 330 nt1.8□□□□□ -2.12
RPB11P38902 RPS12YOR369C 432 nt1.8□□□□□ -2.12
RPB11P38902 TIM12YBR091C 330 nt1.8□□□□□ -2.12
RPB11P38902 BMT2YBR141C 1014 nt1.8□□□□□ -2.12
RPB11P38902 PSY4YBL046W 1326 nt1.8□□□□□ -2.12
RPB11P38902 GET1YGL020C 708 nt1.79□□□□□ -2.12
RPB11P38902 YGL159WYGL159W 1113 nt1.79□□□□□ -2.12
RPB11P38902 YGR149WYGR149W 1299 nt1.79□□□□□ -2.12
RPB11P38902 tW(CCA)G1tW(CCA)G1 72 nt1.79□□□□□ -2.12
RPB11P38902 tW(CCA)G2tW(CCA)G2 72 nt1.79□□□□□ -2.12
RPB11P38902 tW(CCA)JtW(CCA)J 72 nt1.79□□□□□ -2.12
RPB11P38902 tW(CCA)KtW(CCA)K 72 nt1.79□□□□□ -2.12
RPB11P38902 tW(CCA)MtW(CCA)M 72 nt1.79□□□□□ -2.12
RPB11P38902 tW(CCA)PtW(CCA)P 72 nt1.79□□□□□ -2.12
RPB11P38902 RSM26YJR101W 801 nt1.79□□□□□ -2.12
RPB11P38902 MCR1YKL150W 909 nt1.79□□□□□ -2.12
RPB11P38902 YMR320WYMR320W 306 nt1.79□□□□□ -2.12
RPB11P38902 YPL276WYPL276W 438 nt1.79□□□□□ -2.12
RPB11P38902 MRP2YPR166C 348 nt1.79□□□□□ -2.12
RPB11P38902 HSC82YMR186W 2118 nt1.79□□□□□ -2.12
RPB11P38902 UBP15YMR304W 3693 nt1.78□□□□□ -2.12
RPB11P38902 SNU114YKL173W 3027 nt1.78□□□□□ -2.12
RPB11P38902 CLG1YGL215W 1359 nt1.78□□□□□ -2.12
RPB11P38902 MRPL9YGR220C 810 nt1.78□□□□□ -2.12
RPB11P38902 YJL052C-AYJL052C-A 120 nt1.78□□□□□ -2.12
RPB11P38902 BRE1YDL074C 2103 nt1.78□□□□□ -2.13
RPB11P38902 TFC3YAL001C 3483 nt1.78□□□□□ -2.13
RPB11P38902 HUL5YGL141W 2733 nt1.77□□□□□ -2.13
RPB11P38902 NOP14YDL148C 2433 nt1.77□□□□□ -2.13
RPB11P38902 YIL024CYIL024C 570 nt1.77□□□□□ -2.13
RPB11P38902 CAB2YIL083C 1098 nt1.77□□□□□ -2.13
RPB11P38902 RMP1YLR145W 606 nt1.77□□□□□ -2.13
RPB11P38902 MED11YMR112C 396 nt1.77□□□□□ -2.13
RPB11P38902 DGR1YNL130C-A 147 nt1.77□□□□□ -2.13
RPB11P38902 UBP2YOR124C 3819 nt1.77□□□□□ -2.13
RPB11P38902 APD1YBR151W 951 nt1.77□□□□□ -2.13
RPB11P38902 MPS1YDL028C 2295 nt1.77□□□□□ -2.13
RPB11P38902 ERT1YBR239C 1590 nt1.76□□□□□ -2.13
RPB11P38902 TMN3YER113C 2121 nt1.76□□□□□ -2.13
RPB11P38902 SCH9YHR205W 2475 nt1.76□□□□□ -2.13
RPB11P38902 RPL13AYDL082W 600 nt1.76□□□□□ -2.13
RPB11P38902 TIM11YDR322C-A 291 nt1.76□□□□□ -2.13
RPB11P38902 YGL117WYGL117W 798 nt1.76□□□□□ -2.13
RPB11P38902 DOG1YHR044C 741 nt1.76□□□□□ -2.13
RPB11P38902 UTP30YKR060W 825 nt1.76□□□□□ -2.13
RPB11P38902 TFA2YKR062W 987 nt1.76□□□□□ -2.13
RPB11P38902 YAR075WYAR075W 474 nt1.76□□□□□ -2.13
RPB11P38902 RGA1YOR127W 3024 nt1.76□□□□□ -2.13
RPB11P38902 YMR045CYMR045C 5268 nt1.75□□□□□ -2.13
RPB11P38902 YDR133CYDR133C 336 nt1.75□□□□□ -2.13
RPB11P38902 RRF1YHR038W 693 nt1.75□□□□□ -2.13
RPB11P38902 YAL031W-AYAL031W-A 309 nt1.75□□□□□ -2.13
RPB11P38902 IGO1YNL157W 507 nt1.75□□□□□ -2.13
RPB11P38902 ESF2YNR054C 951 nt1.75□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 65.3 ms