Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 RGI2YIL057C 495 nt2.71□□□□□ -1.98
TDA11P38854 GLG2YJL137C 1143 nt2.71□□□□□ -1.98
TDA11P38854 YLR076CYLR076C 423 nt2.71□□□□□ -1.98
TDA11P38854 MCA1YOR197W 1299 nt2.71□□□□□ -1.98
TDA11P38854 YBR292CYBR292C 372 nt2.71□□□□□ -1.98
TDA11P38854 YCG1YDR325W 3108 nt2.71□□□□□ -1.98
TDA11P38854 YKR078WYKR078W 1758 nt2.71□□□□□ -1.98
TDA11P38854 MED1YPR070W 1701 nt2.71□□□□□ -1.98
TDA11P38854 SOK1YDR006C 2706 nt2.7□□□□□ -1.98
TDA11P38854 VMA8YEL051W 771 nt2.7□□□□□ -1.98
TDA11P38854 RPL23BYER117W 414 nt2.7□□□□□ -1.98
TDA11P38854 NNT1YLR285W 786 nt2.7□□□□□ -1.98
TDA11P38854 RPS12YOR369C 432 nt2.7□□□□□ -1.98
TDA11P38854 YOR387CYOR387C 621 nt2.7□□□□□ -1.98
TDA11P38854 CSH1YBR161W 1131 nt2.7□□□□□ -1.98
TDA11P38854 MUS81YDR386W 1899 nt2.7□□□□□ -1.98
TDA11P38854 YME2YMR302C 2553 nt2.7□□□□□ -1.98
TDA11P38854 ADY4YLR227C 1482 nt2.7□□□□□ -1.98
TDA11P38854 GYL1YMR192W 2163 nt2.7□□□□□ -1.98
TDA11P38854 SEC27YGL137W 2670 nt2.69□□□□□ -1.98
TDA11P38854 SKT5YBL061C 2091 nt2.69□□□□□ -1.98
TDA11P38854 BMH2YDR099W 822 nt2.69□□□□□ -1.98
TDA11P38854 YAL034C-BYAL034C-B 354 nt2.69□□□□□ -1.98
TDA11P38854 MET14YKL001C 609 nt2.69□□□□□ -1.98
TDA11P38854 COX14YML129C 213 nt2.69□□□□□ -1.98
TDA11P38854 YMR087WYMR087W 855 nt2.69□□□□□ -1.98
TDA11P38854 RPL20AYMR242C 519 nt2.69□□□□□ -1.98
TDA11P38854 RPL33AYPL143W 324 nt2.69□□□□□ -1.98
TDA11P38854 SRP68YPL243W 1800 nt2.69□□□□□ -1.98
TDA11P38854 PAM1YDR251W 2493 nt2.69□□□□□ -1.98
TDA11P38854 NFT1YKR103W 3657 nt2.69□□□□□ -1.98
TDA11P38854 STE23YLR389C 3084 nt2.69□□□□□ -1.98
TDA11P38854 SLH1YGR271W 5904 nt2.69□□□□□ -1.98
TDA11P38854 SAD1YFR005C 1347 nt2.68□□□□□ -1.98
TDA11P38854 VAC8YEL013W 1737 nt2.68□□□□□ -1.98
TDA11P38854 CYR1YJL005W 6081 nt2.68□□□□□ -1.98
TDA11P38854 RMT2YDR465C 1239 nt2.68□□□□□ -1.98
TDA11P38854 PEF1YGR058W 1008 nt2.68□□□□□ -1.98
TDA11P38854 YGR160WYGR160W 612 nt2.68□□□□□ -1.98
TDA11P38854 MRPL38YKL170W 417 nt2.68□□□□□ -1.98
TDA11P38854 YKR033CYKR033C 426 nt2.68□□□□□ -1.98
TDA11P38854 YLR400WYLR400W 474 nt2.68□□□□□ -1.98
TDA11P38854 PBP2YBR233W 1242 nt2.68□□□□□ -1.98
TDA11P38854 ARO4YBR249C 1113 nt2.68□□□□□ -1.98
TDA11P38854 21S_rRNA21S_rRNA 3296 nt2.67□□□□□ -1.98
TDA11P38854 YDR320W-BYDR320W-B 138 nt2.67□□□□□ -1.98
TDA11P38854 MFA1YDR461W 111 nt2.67□□□□□ -1.98
TDA11P38854 HMF1YER057C 390 nt2.67□□□□□ -1.98
TDA11P38854 SPT15YER148W 723 nt2.67□□□□□ -1.98
TDA11P38854 MRPL9YGR220C 810 nt2.67□□□□□ -1.98
TDA11P38854 YJR056CYJR056C 711 nt2.67□□□□□ -1.98
TDA11P38854 YLR365WYLR365W 333 nt2.67□□□□□ -1.98
TDA11P38854 YMR194C-AYMR194C-A 225 nt2.67□□□□□ -1.98
TDA11P38854 PEX15YOL044W 1152 nt2.67□□□□□ -1.98
TDA11P38854 YOL114CYOL114C 609 nt2.67□□□□□ -1.98
TDA11P38854 MSN1YOL116W 1149 nt2.67□□□□□ -1.98
TDA11P38854 YPR050CYPR050C 414 nt2.67□□□□□ -1.98
TDA11P38854 MRD1YPR112C 2664 nt2.67□□□□□ -1.98
TDA11P38854 EXO84YBR102C 2262 nt2.67□□□□□ -1.98
TDA11P38854 YIL082W-AYIL082W-A 4497 nt2.67□□□□□ -1.98
TDA11P38854 PDC2YDR081C 2778 nt2.66□□□□□ -1.98
TDA11P38854 YER079C-AYER079C-A 339 nt2.66□□□□□ -1.98
TDA11P38854 PRM6YML047C 1059 nt2.66□□□□□ -1.98
TDA11P38854 SUB1YMR039C 879 nt2.66□□□□□ -1.98
TDA11P38854 RIM9YMR063W 720 nt2.66□□□□□ -1.98
TDA11P38854 YMR099CYMR099C 894 nt2.66□□□□□ -1.98
TDA11P38854 CTL1YMR180C 963 nt2.66□□□□□ -1.98
TDA11P38854 KTI11YBL071W-A 249 nt2.66□□□□□ -1.98
TDA11P38854 PUF6YDR496C 1971 nt2.66□□□□□ -1.98
TDA11P38854 YBL005W-BYBL005W-B 5268 nt2.66□□□□□ -1.98
TDA11P38854 KRE2YDR483W 1329 nt2.66□□□□□ -1.98
TDA11P38854 YNL011CYNL011C 1335 nt2.66□□□□□ -1.98
TDA11P38854 PDR17YNL264C 1053 nt2.65□□□□□ -1.99
TDA11P38854 ATG34YOL083W 1239 nt2.65□□□□□ -1.99
TDA11P38854 YOR331CYOR331C 558 nt2.65□□□□□ -1.99
TDA11P38854 CCL1YPR025C 1182 nt2.65□□□□□ -1.99
TDA11P38854 MLH1YMR167W 2310 nt2.65□□□□□ -1.99
TDA11P38854 IRC3YDR332W 2070 nt2.65□□□□□ -1.99
TDA11P38854 RED1YLR263W 2484 nt2.65□□□□□ -1.99
TDA11P38854 MET5YJR137C 4329 nt2.65□□□□□ -1.99
TDA11P38854 TLC1TLC1 1301 nt2.65□□□□□ -1.99
TDA11P38854 POL4YCR014C 1749 nt2.65□□□□□ -1.99
TDA11P38854 RTT10YPL183C 3042 nt2.64□□□□□ -1.99
TDA11P38854 UTP15YMR093W 1542 nt2.64□□□□□ -1.99
TDA11P38854 DSE4YNR067C 3354 nt2.64□□□□□ -1.99
TDA11P38854 SNU23YDL098C 585 nt2.64□□□□□ -1.99
TDA11P38854 TDA10YGR205W 873 nt2.64□□□□□ -1.99
TDA11P38854 RPA12YJR063W 378 nt2.64□□□□□ -1.99
TDA11P38854 VPS25YJR102C 609 nt2.64□□□□□ -1.99
TDA11P38854 YKL070WYKL070W 510 nt2.64□□□□□ -1.99
TDA11P38854 PIR1YKL164C 1026 nt2.64□□□□□ -1.99
TDA11P38854 REC102YLR329W 795 nt2.64□□□□□ -1.99
TDA11P38854 BET5YML077W 480 nt2.64□□□□□ -1.99
TDA11P38854 PRE8YML092C 753 nt2.64□□□□□ -1.99
TDA11P38854 INP1YMR204C 1263 nt2.64□□□□□ -1.99
TDA11P38854 YNL276CYNL276C 396 nt2.64□□□□□ -1.99
TDA11P38854 DPB3YBR278W 606 nt2.64□□□□□ -1.99
TDA11P38854 ESL2YKR096W 3588 nt2.64□□□□□ -1.99
TDA11P38854 VHR2YER064C 1518 nt2.63□□□□□ -1.99
TDA11P38854 PSP1YDR505C 2526 nt2.63□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms