Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRNB4P30926 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRNB4P30926 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB4P30926 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB4P30926 RBM17P2-201ENST00000616397 1405 ntBASIC18.63■□□□□ 0.57
CHRNB4P30926 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRNB4P30926 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB4P30926 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNB4P30926 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHRNB4P30926 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB4P30926 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRNB4P30926 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNB4P30926 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRNB4P30926 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB4P30926 RARRES2P4-201ENST00000514074 484 ntBASIC18.62■□□□□ 0.57
CHRNB4P30926 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNB4P30926 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CHRNB4P30926 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRNB4P30926 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRNB4P30926 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB4P30926 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB4P30926 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB4P30926 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB4P30926 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB4P30926 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNB4P30926 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNB4P30926 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
CHRNB4P30926 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB4P30926 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB4P30926 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHRNB4P30926 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
CHRNB4P30926 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB4P30926 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB4P30926 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNB4P30926 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB4P30926 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNB4P30926 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNB4P30926 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.61■□□□□ 0.57
CHRNB4P30926 AC083880.1-201ENST00000608266 535 ntBASIC18.61■□□□□ 0.57
CHRNB4P30926 AC243732.1-201ENST00000612648 864 ntBASIC18.61■□□□□ 0.57
CHRNB4P30926 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.61■□□□□ 0.57
CHRNB4P30926 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB4P30926 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB4P30926 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNB4P30926 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHRNB4P30926 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNB4P30926 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CHRNB4P30926 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHRNB4P30926 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 MYC-209ENST00000641252 345 ntBASIC18.6■□□□□ 0.57
CHRNB4P30926 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.6■□□□□ 0.57
CHRNB4P30926 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHRNB4P30926 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNB4P30926 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNB4P30926 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNB4P30926 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNB4P30926 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRNB4P30926 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 AC010980.2-201ENST00000587099 1412 ntBASIC18.59■□□□□ 0.57
CHRNB4P30926 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHRNB4P30926 PRORSD1P-201ENST00000295112 541 ntBASIC18.59■□□□□ 0.57
CHRNB4P30926 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CHRNB4P30926 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNB4P30926 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNB4P30926 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNB4P30926 AC133561.1-201ENST00000568600 2415 ntBASIC18.59■□□□□ 0.57
CHRNB4P30926 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNB4P30926 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNB4P30926 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNB4P30926 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNB4P30926 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNB4P30926 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRNB4P30926 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNB4P30926 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNB4P30926 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNB4P30926 AC087742.1-201ENST00000575880 1738 ntBASIC18.58■□□□□ 0.57
CHRNB4P30926 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNB4P30926 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNB4P30926 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.58■□□□□ 0.57
CHRNB4P30926 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNB4P30926 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNB4P30926 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNB4P30926 AC091874.3-201ENST00000512672 1195 ntBASIC18.58■□□□□ 0.56
CHRNB4P30926 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms