Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.08■□□□□ 0.81
HTR1EP28566 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HTR1EP28566 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.08■□□□□ 0.81
HTR1EP28566 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HTR1EP28566 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HTR1EP28566 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HTR1EP28566 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.08■□□□□ 0.8
HTR1EP28566 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HTR1EP28566 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HTR1EP28566 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.08■□□□□ 0.8
HTR1EP28566 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTR1EP28566 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HTR1EP28566 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTR1EP28566 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HTR1EP28566 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.07■□□□□ 0.8
HTR1EP28566 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTR1EP28566 KRT18P5-201ENST00000436075 1291 ntBASIC20.07■□□□□ 0.8
HTR1EP28566 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.07■□□□□ 0.8
HTR1EP28566 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTR1EP28566 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.07■□□□□ 0.8
HTR1EP28566 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.07■□□□□ 0.8
HTR1EP28566 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTR1EP28566 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
HTR1EP28566 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.07■□□□□ 0.8
HTR1EP28566 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
HTR1EP28566 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTR1EP28566 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.07■□□□□ 0.8
HTR1EP28566 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HTR1EP28566 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTR1EP28566 AC133637.1-201ENST00000624115 1537 ntBASIC20.07■□□□□ 0.8
HTR1EP28566 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.06■□□□□ 0.8
HTR1EP28566 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HTR1EP28566 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.06■□□□□ 0.8
HTR1EP28566 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.06■□□□□ 0.8
HTR1EP28566 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 SLC47A1P1-202ENST00000449666 945 ntBASIC20.06■□□□□ 0.8
HTR1EP28566 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.06■□□□□ 0.8
HTR1EP28566 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.06■□□□□ 0.8
HTR1EP28566 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.06■□□□□ 0.8
HTR1EP28566 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 AC068587.7-201ENST00000641602 218 ntBASIC20.06■□□□□ 0.8
HTR1EP28566 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.06■□□□□ 0.8
HTR1EP28566 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
HTR1EP28566 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HTR1EP28566 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.05■□□□□ 0.8
HTR1EP28566 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.05■□□□□ 0.8
HTR1EP28566 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.05■□□□□ 0.8
HTR1EP28566 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HTR1EP28566 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
HTR1EP28566 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.05■□□□□ 0.8
HTR1EP28566 YBX1P1-201ENST00000445822 960 ntBASIC20.05■□□□□ 0.8
HTR1EP28566 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.05■□□□□ 0.8
HTR1EP28566 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.05■□□□□ 0.8
HTR1EP28566 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
HTR1EP28566 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HTR1EP28566 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HTR1EP28566 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR1EP28566 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR1EP28566 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR1EP28566 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.04■□□□□ 0.8
HTR1EP28566 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR1EP28566 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR1EP28566 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HTR1EP28566 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.04■□□□□ 0.8
HTR1EP28566 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR1EP28566 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.04■□□□□ 0.8
HTR1EP28566 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR1EP28566 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HTR1EP28566 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1EP28566 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1EP28566 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1EP28566 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1EP28566 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.03■□□□□ 0.8
HTR1EP28566 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1EP28566 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HTR1EP28566 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1EP28566 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1EP28566 AC126544.1-201ENST00000580842 1059 ntBASIC20.03■□□□□ 0.8
HTR1EP28566 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1EP28566 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms