Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CAPN3P20807 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CAPN3P20807 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CAPN3P20807 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 MIR939-201ENST00000401314 82 ntBASIC20.19■□□□□ 0.82
CAPN3P20807 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CAPN3P20807 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN3P20807 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN3P20807 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CAPN3P20807 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN3P20807 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CAPN3P20807 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN3P20807 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CAPN3P20807 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPN3P20807 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPN3P20807 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CAPN3P20807 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CAPN3P20807 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN3P20807 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN3P20807 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN3P20807 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN3P20807 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN3P20807 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.17■□□□□ 0.82
CAPN3P20807 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.17■□□□□ 0.82
CAPN3P20807 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN3P20807 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.17■□□□□ 0.82
CAPN3P20807 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN3P20807 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CAPN3P20807 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CAPN3P20807 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN3P20807 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CAPN3P20807 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN3P20807 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN3P20807 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPN3P20807 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN3P20807 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CAPN3P20807 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPN3P20807 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 AC087623.3-201ENST00000607047 1098 ntBASIC20.16■□□□□ 0.82
CAPN3P20807 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN3P20807 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.16■□□□□ 0.82
CAPN3P20807 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN3P20807 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CAPN3P20807 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN3P20807 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CAPN3P20807 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.15■□□□□ 0.82
CAPN3P20807 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CAPN3P20807 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CAPN3P20807 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CAPN3P20807 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CAPN3P20807 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPN3P20807 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPN3P20807 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPN3P20807 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN3P20807 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.14■□□□□ 0.81
CAPN3P20807 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN3P20807 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
CAPN3P20807 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms