Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP3CBP16298 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.78■□□□□ 0.6
PPP3CBP16298 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP3CBP16298 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP3CBP16298 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPP3CBP16298 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PPP3CBP16298 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP3CBP16298 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.77■□□□□ 0.6
PPP3CBP16298 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PPP3CBP16298 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PPP3CBP16298 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPP3CBP16298 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.77■□□□□ 0.6
PPP3CBP16298 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP3CBP16298 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.77■□□□□ 0.6
PPP3CBP16298 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.77■□□□□ 0.6
PPP3CBP16298 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP3CBP16298 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP3CBP16298 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PPP3CBP16298 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.77■□□□□ 0.6
PPP3CBP16298 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PPP3CBP16298 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PPP3CBP16298 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PPP3CBP16298 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP3CBP16298 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PPP3CBP16298 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP3CBP16298 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PPP3CBP16298 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP3CBP16298 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP3CBP16298 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PPP3CBP16298 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP3CBP16298 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PPP3CBP16298 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.76■□□□□ 0.59
PPP3CBP16298 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP3CBP16298 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP3CBP16298 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP3CBP16298 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PPP3CBP16298 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PPP3CBP16298 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 ID1-201ENST00000376105 1233 ntBASIC18.75■□□□□ 0.59
PPP3CBP16298 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PPP3CBP16298 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP3CBP16298 RNF165-205ENST00000588679 2904 ntBASIC18.75■□□□□ 0.59
PPP3CBP16298 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PPP3CBP16298 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP3CBP16298 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CBP16298 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PPP3CBP16298 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.74■□□□□ 0.59
PPP3CBP16298 AP004607.7-201ENST00000527152 1677 ntBASIC18.74■□□□□ 0.59
PPP3CBP16298 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CBP16298 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.74■□□□□ 0.59
PPP3CBP16298 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP3CBP16298 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP3CBP16298 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.74■□□□□ 0.59
PPP3CBP16298 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP3CBP16298 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CBP16298 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP3CBP16298 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CBP16298 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CBP16298 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CBP16298 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CBP16298 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CBP16298 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP3CBP16298 AC055733.4-201ENST00000638462 1354 ntBASIC18.73■□□□□ 0.59
PPP3CBP16298 AC026185.1-201ENST00000445748 174 ntBASIC18.73■□□□□ 0.59
PPP3CBP16298 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.73■□□□□ 0.59
PPP3CBP16298 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.73■□□□□ 0.59
PPP3CBP16298 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.73■□□□□ 0.59
PPP3CBP16298 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.73■□□□□ 0.59
PPP3CBP16298 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.73■□□□□ 0.59
PPP3CBP16298 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CBP16298 AC104187.1-201ENST00000607510 612 ntBASIC18.73■□□□□ 0.59
PPP3CBP16298 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.73■□□□□ 0.59
PPP3CBP16298 AC073111.5-205ENST00000641717 521 ntBASIC18.73■□□□□ 0.59
PPP3CBP16298 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CBP16298 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PPP3CBP16298 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP3CBP16298 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP3CBP16298 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PPP3CBP16298 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CBP16298 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CBP16298 C11orf96-202ENST00000528572 1834 ntBASIC18.72■□□□□ 0.59
PPP3CBP16298 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CBP16298 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CBP16298 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.72■□□□□ 0.59
PPP3CBP16298 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.72■□□□□ 0.59
PPP3CBP16298 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.72■□□□□ 0.59
PPP3CBP16298 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CBP16298 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CBP16298 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.72■□□□□ 0.59
PPP3CBP16298 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CBP16298 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP3CBP16298 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms