Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 PSD2YGR170W 3417 nt2.06□□□□□ -2.08
RPL40BP0CH09 SPT2YER161C 1002 nt2.06□□□□□ -2.08
RPL40BP0CH09 MRPL49YJL096W 486 nt2.06□□□□□ -2.08
RPL40BP0CH09 RPL17BYJL177W 555 nt2.06□□□□□ -2.08
RPL40BP0CH09 MET14YKL001C 609 nt2.06□□□□□ -2.08
RPL40BP0CH09 MTR2YKL186C 555 nt2.06□□□□□ -2.08
RPL40BP0CH09 YBL029C-AYBL029C-A 285 nt2.06□□□□□ -2.08
RPL40BP0CH09 YPR027CYPR027C 834 nt2.06□□□□□ -2.08
RPL40BP0CH09 YIG1YPL201C 1386 nt2.06□□□□□ -2.08
RPL40BP0CH09 DBP5YOR046C 1449 nt2.06□□□□□ -2.08
RPL40BP0CH09 YNL193WYNL193W 1677 nt2.06□□□□□ -2.08
RPL40BP0CH09 SFB2YNL049C 2631 nt2.05□□□□□ -2.08
RPL40BP0CH09 CSF1YLR087C 8877 nt2.05□□□□□ -2.08
RPL40BP0CH09 YJR039WYJR039W 3366 nt2.05□□□□□ -2.08
RPL40BP0CH09 UTP22YGR090W 3714 nt2.05□□□□□ -2.08
RPL40BP0CH09 ERV14YGL054C 417 nt2.05□□□□□ -2.08
RPL40BP0CH09 RPL1BYGL135W 654 nt2.05□□□□□ -2.08
RPL40BP0CH09 CAB2YIL083C 1098 nt2.05□□□□□ -2.08
RPL40BP0CH09 YKR011CYKR011C 1062 nt2.05□□□□□ -2.08
RPL40BP0CH09 RPL1AYPL220W 654 nt2.05□□□□□ -2.08
RPL40BP0CH09 ACM1YPL267W 630 nt2.05□□□□□ -2.08
RPL40BP0CH09 YPK3YBR028C 1578 nt2.05□□□□□ -2.08
RPL40BP0CH09 SSE1YPL106C 2082 nt2.05□□□□□ -2.08
RPL40BP0CH09 DNF1YER166W 4716 nt2.05□□□□□ -2.08
RPL40BP0CH09 SWR1YDR334W 4545 nt2.04□□□□□ -2.08
RPL40BP0CH09 CCH1YGR217W 6120 nt2.04□□□□□ -2.08
RPL40BP0CH09 TPS2YDR074W 2691 nt2.04□□□□□ -2.08
RPL40BP0CH09 YDR535CYDR535C 501 nt2.04□□□□□ -2.08
RPL40BP0CH09 TAM41YGR046W 1158 nt2.04□□□□□ -2.08
RPL40BP0CH09 PHO81YGR233C 3537 nt2.04□□□□□ -2.08
RPL40BP0CH09 YHL006W-AYHL006W-A 354 nt2.04□□□□□ -2.08
RPL40BP0CH09 YHL037CYHL037C 402 nt2.04□□□□□ -2.08
RPL40BP0CH09 ENV10YLR065C 546 nt2.04□□□□□ -2.08
RPL40BP0CH09 UTP13YLR222C 2454 nt2.04□□□□□ -2.08
RPL40BP0CH09 NDL1YLR254C 570 nt2.04□□□□□ -2.08
RPL40BP0CH09 REC102YLR329W 795 nt2.04□□□□□ -2.08
RPL40BP0CH09 CPR3YML078W 549 nt2.04□□□□□ -2.08
RPL40BP0CH09 USV1YPL230W 1176 nt2.04□□□□□ -2.08
RPL40BP0CH09 PSK1YAL017W 4071 nt2.04□□□□□ -2.08
RPL40BP0CH09 VPS3YDR495C 3036 nt2.04□□□□□ -2.08
RPL40BP0CH09 PIP2YOR363C 2991 nt2.04□□□□□ -2.08
RPL40BP0CH09 VPH1YOR270C 2523 nt2.03□□□□□ -2.08
RPL40BP0CH09 SGM1YJR134C 2124 nt2.03□□□□□ -2.08
RPL40BP0CH09 RAV1YJR033C 4074 nt2.03□□□□□ -2.08
RPL40BP0CH09 ALK2YBL009W 2031 nt2.03□□□□□ -2.08
RPL40BP0CH09 CIK1YMR198W 1785 nt2.03□□□□□ -2.08
RPL40BP0CH09 APM1YPL259C 1428 nt2.03□□□□□ -2.08
RPL40BP0CH09 YJL070CYJL070C 2667 nt2.03□□□□□ -2.08
RPL40BP0CH09 YDR098C-AYDR098C-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YDR210C-CYDR210C-C 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YDR261C-CYDR261C-C 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YDR316W-AYDR316W-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YDR365W-AYDR365W-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YER137C-AYER137C-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YER159C-AYER159C-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YGR027W-AYGR027W-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YGR038C-AYGR038C-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YGR161C-CYGR161C-C 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YJR026WYJR026W 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YJR028WYJR028W 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YAR010CYAR010C 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YLR157C-AYLR157C-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YLR227W-AYLR227W-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YLR256W-AYLR256W-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YML040WYML040W 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YML045W-AYML045W-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YMR051CYMR051C 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YNL054W-AYNL054W-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YOL103W-AYOL103W-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YPL257W-AYPL257W-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YPR137C-AYPR137C-A 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 YPR158C-CYPR158C-C 1323 nt2.03□□□□□ -2.08
RPL40BP0CH09 RPS29BYDL061C 171 nt2.03□□□□□ -2.08
RPL40BP0CH09 TGL2YDR058C 981 nt2.03□□□□□ -2.08
RPL40BP0CH09 IME1YJR094C 1083 nt2.03□□□□□ -2.08
RPL40BP0CH09 YKR051WYKR051W 1257 nt2.03□□□□□ -2.08
RPL40BP0CH09 RIM13YMR154C 2184 nt2.03□□□□□ -2.08
RPL40BP0CH09 TMA64YDR117C 1698 nt2.02□□□□□ -2.09
RPL40BP0CH09 SCH9YHR205W 2475 nt2.02□□□□□ -2.09
RPL40BP0CH09 KAR5YMR065W 1515 nt2.02□□□□□ -2.09
RPL40BP0CH09 FAR11YNL127W 2862 nt2.02□□□□□ -2.09
RPL40BP0CH09 YEL028WYEL028W 462 nt2.02□□□□□ -2.09
RPL40BP0CH09 PET130YJL023C 1044 nt2.02□□□□□ -2.09
RPL40BP0CH09 YJL028WYJL028W 336 nt2.02□□□□□ -2.09
RPL40BP0CH09 GAB1YLR459W 1185 nt2.02□□□□□ -2.09
RPL40BP0CH09 AIM32YML050W 936 nt2.02□□□□□ -2.09
RPL40BP0CH09 HHF2YNL030W 312 nt2.02□□□□□ -2.09
RPL40BP0CH09 MTL1YGR023W 1656 nt2.02□□□□□ -2.09
RPL40BP0CH09 SEC31YDL195W 3822 nt2.02□□□□□ -2.09
RPL40BP0CH09 IRA2YOL081W 9240 nt2.02□□□□□ -2.09
RPL40BP0CH09 YKL075CYKL075C 1353 nt2.01□□□□□ -2.09
RPL40BP0CH09 MCD1YDL003W 1701 nt2.01□□□□□ -2.09
RPL40BP0CH09 RPC11YDR045C 333 nt2.01□□□□□ -2.09
RPL40BP0CH09 RRP8YDR083W 1179 nt2.01□□□□□ -2.09
RPL40BP0CH09 KXD1YGL079W 657 nt2.01□□□□□ -2.09
RPL40BP0CH09 YJL119CYJL119C 324 nt2.01□□□□□ -2.09
RPL40BP0CH09 AAR2YBL074C 1068 nt2.01□□□□□ -2.09
RPL40BP0CH09 HAT1YPL001W 1125 nt2.01□□□□□ -2.09
RPL40BP0CH09 YPL142CYPL142C 318 nt2.01□□□□□ -2.09
RPL40BP0CH09 CNS1YBR155W 1158 nt2.01□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 59.3 ms