Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 PSD2YGR170W 3417 nt2.06□□□□□ -2.08
RPL40AP0CH08 SPT2YER161C 1002 nt2.06□□□□□ -2.08
RPL40AP0CH08 MRPL49YJL096W 486 nt2.06□□□□□ -2.08
RPL40AP0CH08 RPL17BYJL177W 555 nt2.06□□□□□ -2.08
RPL40AP0CH08 MET14YKL001C 609 nt2.06□□□□□ -2.08
RPL40AP0CH08 MTR2YKL186C 555 nt2.06□□□□□ -2.08
RPL40AP0CH08 YBL029C-AYBL029C-A 285 nt2.06□□□□□ -2.08
RPL40AP0CH08 YPR027CYPR027C 834 nt2.06□□□□□ -2.08
RPL40AP0CH08 YIG1YPL201C 1386 nt2.06□□□□□ -2.08
RPL40AP0CH08 DBP5YOR046C 1449 nt2.06□□□□□ -2.08
RPL40AP0CH08 YNL193WYNL193W 1677 nt2.06□□□□□ -2.08
RPL40AP0CH08 SFB2YNL049C 2631 nt2.05□□□□□ -2.08
RPL40AP0CH08 CSF1YLR087C 8877 nt2.05□□□□□ -2.08
RPL40AP0CH08 YJR039WYJR039W 3366 nt2.05□□□□□ -2.08
RPL40AP0CH08 UTP22YGR090W 3714 nt2.05□□□□□ -2.08
RPL40AP0CH08 ERV14YGL054C 417 nt2.05□□□□□ -2.08
RPL40AP0CH08 RPL1BYGL135W 654 nt2.05□□□□□ -2.08
RPL40AP0CH08 CAB2YIL083C 1098 nt2.05□□□□□ -2.08
RPL40AP0CH08 YKR011CYKR011C 1062 nt2.05□□□□□ -2.08
RPL40AP0CH08 RPL1AYPL220W 654 nt2.05□□□□□ -2.08
RPL40AP0CH08 ACM1YPL267W 630 nt2.05□□□□□ -2.08
RPL40AP0CH08 YPK3YBR028C 1578 nt2.05□□□□□ -2.08
RPL40AP0CH08 SSE1YPL106C 2082 nt2.05□□□□□ -2.08
RPL40AP0CH08 DNF1YER166W 4716 nt2.05□□□□□ -2.08
RPL40AP0CH08 SWR1YDR334W 4545 nt2.04□□□□□ -2.08
RPL40AP0CH08 CCH1YGR217W 6120 nt2.04□□□□□ -2.08
RPL40AP0CH08 TPS2YDR074W 2691 nt2.04□□□□□ -2.08
RPL40AP0CH08 YDR535CYDR535C 501 nt2.04□□□□□ -2.08
RPL40AP0CH08 TAM41YGR046W 1158 nt2.04□□□□□ -2.08
RPL40AP0CH08 PHO81YGR233C 3537 nt2.04□□□□□ -2.08
RPL40AP0CH08 YHL006W-AYHL006W-A 354 nt2.04□□□□□ -2.08
RPL40AP0CH08 YHL037CYHL037C 402 nt2.04□□□□□ -2.08
RPL40AP0CH08 ENV10YLR065C 546 nt2.04□□□□□ -2.08
RPL40AP0CH08 UTP13YLR222C 2454 nt2.04□□□□□ -2.08
RPL40AP0CH08 NDL1YLR254C 570 nt2.04□□□□□ -2.08
RPL40AP0CH08 REC102YLR329W 795 nt2.04□□□□□ -2.08
RPL40AP0CH08 CPR3YML078W 549 nt2.04□□□□□ -2.08
RPL40AP0CH08 USV1YPL230W 1176 nt2.04□□□□□ -2.08
RPL40AP0CH08 PSK1YAL017W 4071 nt2.04□□□□□ -2.08
RPL40AP0CH08 VPS3YDR495C 3036 nt2.04□□□□□ -2.08
RPL40AP0CH08 PIP2YOR363C 2991 nt2.04□□□□□ -2.08
RPL40AP0CH08 VPH1YOR270C 2523 nt2.03□□□□□ -2.08
RPL40AP0CH08 SGM1YJR134C 2124 nt2.03□□□□□ -2.08
RPL40AP0CH08 RAV1YJR033C 4074 nt2.03□□□□□ -2.08
RPL40AP0CH08 ALK2YBL009W 2031 nt2.03□□□□□ -2.08
RPL40AP0CH08 CIK1YMR198W 1785 nt2.03□□□□□ -2.08
RPL40AP0CH08 APM1YPL259C 1428 nt2.03□□□□□ -2.08
RPL40AP0CH08 YJL070CYJL070C 2667 nt2.03□□□□□ -2.08
RPL40AP0CH08 YDR098C-AYDR098C-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YDR210C-CYDR210C-C 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YDR261C-CYDR261C-C 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YDR316W-AYDR316W-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YDR365W-AYDR365W-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YER137C-AYER137C-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YER159C-AYER159C-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YGR027W-AYGR027W-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YGR038C-AYGR038C-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YGR161C-CYGR161C-C 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YJR026WYJR026W 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YJR028WYJR028W 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YAR010CYAR010C 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YLR157C-AYLR157C-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YLR227W-AYLR227W-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YLR256W-AYLR256W-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YML040WYML040W 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YML045W-AYML045W-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YMR051CYMR051C 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YNL054W-AYNL054W-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YOL103W-AYOL103W-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YPL257W-AYPL257W-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YPR137C-AYPR137C-A 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 YPR158C-CYPR158C-C 1323 nt2.03□□□□□ -2.08
RPL40AP0CH08 RPS29BYDL061C 171 nt2.03□□□□□ -2.08
RPL40AP0CH08 TGL2YDR058C 981 nt2.03□□□□□ -2.08
RPL40AP0CH08 IME1YJR094C 1083 nt2.03□□□□□ -2.08
RPL40AP0CH08 YKR051WYKR051W 1257 nt2.03□□□□□ -2.08
RPL40AP0CH08 RIM13YMR154C 2184 nt2.03□□□□□ -2.08
RPL40AP0CH08 TMA64YDR117C 1698 nt2.02□□□□□ -2.09
RPL40AP0CH08 SCH9YHR205W 2475 nt2.02□□□□□ -2.09
RPL40AP0CH08 KAR5YMR065W 1515 nt2.02□□□□□ -2.09
RPL40AP0CH08 FAR11YNL127W 2862 nt2.02□□□□□ -2.09
RPL40AP0CH08 YEL028WYEL028W 462 nt2.02□□□□□ -2.09
RPL40AP0CH08 PET130YJL023C 1044 nt2.02□□□□□ -2.09
RPL40AP0CH08 YJL028WYJL028W 336 nt2.02□□□□□ -2.09
RPL40AP0CH08 GAB1YLR459W 1185 nt2.02□□□□□ -2.09
RPL40AP0CH08 AIM32YML050W 936 nt2.02□□□□□ -2.09
RPL40AP0CH08 HHF2YNL030W 312 nt2.02□□□□□ -2.09
RPL40AP0CH08 MTL1YGR023W 1656 nt2.02□□□□□ -2.09
RPL40AP0CH08 SEC31YDL195W 3822 nt2.02□□□□□ -2.09
RPL40AP0CH08 IRA2YOL081W 9240 nt2.02□□□□□ -2.09
RPL40AP0CH08 YKL075CYKL075C 1353 nt2.01□□□□□ -2.09
RPL40AP0CH08 MCD1YDL003W 1701 nt2.01□□□□□ -2.09
RPL40AP0CH08 RPC11YDR045C 333 nt2.01□□□□□ -2.09
RPL40AP0CH08 RRP8YDR083W 1179 nt2.01□□□□□ -2.09
RPL40AP0CH08 KXD1YGL079W 657 nt2.01□□□□□ -2.09
RPL40AP0CH08 YJL119CYJL119C 324 nt2.01□□□□□ -2.09
RPL40AP0CH08 AAR2YBL074C 1068 nt2.01□□□□□ -2.09
RPL40AP0CH08 HAT1YPL001W 1125 nt2.01□□□□□ -2.09
RPL40AP0CH08 YPL142CYPL142C 318 nt2.01□□□□□ -2.09
RPL40AP0CH08 CNS1YBR155W 1158 nt2.01□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 20.6 ms