Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.11■□□□□ 0.49
CSF1P09603 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CSF1P09603 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CSF1P09603 AC142381.2-201ENST00000566120 298 ntBASIC18.11■□□□□ 0.49
CSF1P09603 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.11■□□□□ 0.49
CSF1P09603 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSF1P09603 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CSF1P09603 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1P09603 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1P09603 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CSF1P09603 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CSF1P09603 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1P09603 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1P09603 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1P09603 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.1■□□□□ 0.49
CSF1P09603 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
CSF1P09603 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.1■□□□□ 0.49
CSF1P09603 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CSF1P09603 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1P09603 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CSF1P09603 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSF1P09603 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.09■□□□□ 0.49
CSF1P09603 AC106739.1-201ENST00000617035 715 ntBASIC18.09■□□□□ 0.49
CSF1P09603 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.09■□□□□ 0.49
CSF1P09603 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSF1P09603 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.09■□□□□ 0.49
CSF1P09603 RNF165-205ENST00000588679 2904 ntBASIC18.09■□□□□ 0.49
CSF1P09603 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSF1P09603 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSF1P09603 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.08■□□□□ 0.49
CSF1P09603 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSF1P09603 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSF1P09603 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSF1P09603 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSF1P09603 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSF1P09603 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSF1P09603 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.08■□□□□ 0.48
CSF1P09603 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CSF1P09603 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSF1P09603 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSF1P09603 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.08■□□□□ 0.48
CSF1P09603 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CSF1P09603 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSF1P09603 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CSF1P09603 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CSF1P09603 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSF1P09603 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSF1P09603 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSF1P09603 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CSF1P09603 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSF1P09603 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CSF1P09603 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSF1P09603 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.07■□□□□ 0.48
CSF1P09603 AC079089.2-201ENST00000531211 1277 ntBASIC18.07■□□□□ 0.48
CSF1P09603 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSF1P09603 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.07■□□□□ 0.48
CSF1P09603 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.07■□□□□ 0.48
CSF1P09603 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CSF1P09603 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.07■□□□□ 0.48
CSF1P09603 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CSF1P09603 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.07■□□□□ 0.48
CSF1P09603 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CSF1P09603 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSF1P09603 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.07■□□□□ 0.48
CSF1P09603 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSF1P09603 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
CSF1P09603 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.06■□□□□ 0.48
CSF1P09603 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CSF1P09603 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSF1P09603 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSF1P09603 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSF1P09603 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.06■□□□□ 0.48
CSF1P09603 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.06■□□□□ 0.48
CSF1P09603 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.06■□□□□ 0.48
CSF1P09603 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.06■□□□□ 0.48
CSF1P09603 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSF1P09603 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.06■□□□□ 0.48
CSF1P09603 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CSF1P09603 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSF1P09603 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CSF1P09603 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms