Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.43■■□□□ 1.02
COL4A2P08572 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.43■■□□□ 1.02
COL4A2P08572 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A2P08572 PNMA6B-201ENST00000538162 1200 ntBASIC21.43■■□□□ 1.02
COL4A2P08572 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.43■■□□□ 1.02
COL4A2P08572 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL4A2P08572 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A2P08572 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A2P08572 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A2P08572 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A2P08572 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.42■■□□□ 1.02
COL4A2P08572 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.42■■□□□ 1.02
COL4A2P08572 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A2P08572 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A2P08572 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A2P08572 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.42■■□□□ 1.02
COL4A2P08572 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
COL4A2P08572 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL4A2P08572 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.41■■□□□ 1.02
COL4A2P08572 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
COL4A2P08572 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A2P08572 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A2P08572 AC100791.3-201ENST00000617619 330 ntBASIC21.41■■□□□ 1.02
COL4A2P08572 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A2P08572 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A2P08572 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A2P08572 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.41■■□□□ 1.02
COL4A2P08572 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.41■■□□□ 1.02
COL4A2P08572 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
COL4A2P08572 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A2P08572 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A2P08572 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL4A2P08572 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
COL4A2P08572 AC008550.1-201ENST00000511500 884 ntBASIC21.41■■□□□ 1.02
COL4A2P08572 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.41■■□□□ 1.02
COL4A2P08572 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.41■■□□□ 1.02
COL4A2P08572 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.41■■□□□ 1.02
COL4A2P08572 AC069544.1-201ENST00000609399 999 ntBASIC21.41■■□□□ 1.02
COL4A2P08572 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A2P08572 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.4■■□□□ 1.02
COL4A2P08572 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.4■■□□□ 1.02
COL4A2P08572 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A2P08572 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
COL4A2P08572 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A2P08572 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
COL4A2P08572 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A2P08572 LSM12P1-201ENST00000411836 588 ntBASIC21.4■■□□□ 1.02
COL4A2P08572 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A2P08572 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A2P08572 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL4A2P08572 AC233263.1-201ENST00000578059 224 ntBASIC21.4■■□□□ 1.02
COL4A2P08572 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
COL4A2P08572 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
COL4A2P08572 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A2P08572 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.39■■□□□ 1.01
COL4A2P08572 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.39■■□□□ 1.01
COL4A2P08572 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
COL4A2P08572 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
COL4A2P08572 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.39■■□□□ 1.01
COL4A2P08572 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.39■■□□□ 1.01
COL4A2P08572 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.39■■□□□ 1.01
COL4A2P08572 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.39■■□□□ 1.01
COL4A2P08572 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.39■■□□□ 1.01
COL4A2P08572 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.39■■□□□ 1.01
COL4A2P08572 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL4A2P08572 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
COL4A2P08572 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.39■■□□□ 1.01
COL4A2P08572 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
COL4A2P08572 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A2P08572 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A2P08572 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.38■■□□□ 1.01
COL4A2P08572 RPS2P4-201ENST00000476944 856 ntBASIC21.38■■□□□ 1.01
COL4A2P08572 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.38■■□□□ 1.01
COL4A2P08572 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.38■■□□□ 1.01
COL4A2P08572 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A2P08572 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.38■■□□□ 1.01
COL4A2P08572 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.38■■□□□ 1.01
COL4A2P08572 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.38■■□□□ 1.01
COL4A2P08572 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.38■■□□□ 1.01
COL4A2P08572 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
COL4A2P08572 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A2P08572 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A2P08572 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A2P08572 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A2P08572 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL4A2P08572 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.38■■□□□ 1.01
COL4A2P08572 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.38■■□□□ 1.01
COL4A2P08572 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.38■■□□□ 1.01
COL4A2P08572 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL4A2P08572 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL4A2P08572 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
COL4A2P08572 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL4A2P08572 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.37■■□□□ 1.01
COL4A2P08572 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL4A2P08572 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL4A2P08572 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL4A2P08572 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL4A2P08572 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL4A2P08572 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.37■■□□□ 1.01
COL4A2P08572 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms