Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CAPN1P07384 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN1P07384 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN1P07384 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN1P07384 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CAPN1P07384 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN1P07384 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.64■□□□□ 0.89
CAPN1P07384 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.64■□□□□ 0.89
CAPN1P07384 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN1P07384 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.64■□□□□ 0.89
CAPN1P07384 NTF6G-201ENST00000591094 616 ntBASIC20.64■□□□□ 0.89
CAPN1P07384 TPRG1LP1-201ENST00000598702 760 ntBASIC20.64■□□□□ 0.89
CAPN1P07384 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CAPN1P07384 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CAPN1P07384 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN1P07384 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN1P07384 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.63■□□□□ 0.89
CAPN1P07384 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN1P07384 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN1P07384 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN1P07384 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CAPN1P07384 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN1P07384 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN1P07384 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN1P07384 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN1P07384 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN1P07384 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.63■□□□□ 0.89
CAPN1P07384 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.63■□□□□ 0.89
CAPN1P07384 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN1P07384 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.63■□□□□ 0.89
CAPN1P07384 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CAPN1P07384 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN1P07384 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CAPN1P07384 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CAPN1P07384 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CAPN1P07384 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.62■□□□□ 0.89
CAPN1P07384 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.62■□□□□ 0.89
CAPN1P07384 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.62■□□□□ 0.89
CAPN1P07384 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.62■□□□□ 0.89
CAPN1P07384 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CAPN1P07384 AC003102.1-202ENST00000563394 1796 ntBASIC20.62■□□□□ 0.89
CAPN1P07384 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CAPN1P07384 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CAPN1P07384 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.61■□□□□ 0.89
CAPN1P07384 AL137784.2-201ENST00000607332 1000 ntBASIC20.61■□□□□ 0.89
CAPN1P07384 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CAPN1P07384 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.61■□□□□ 0.89
CAPN1P07384 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CAPN1P07384 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CAPN1P07384 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.61■□□□□ 0.89
CAPN1P07384 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN1P07384 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.6■□□□□ 0.89
CAPN1P07384 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN1P07384 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN1P07384 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN1P07384 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN1P07384 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN1P07384 KRT18P61-201ENST00000585825 1298 ntBASIC20.6■□□□□ 0.89
CAPN1P07384 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN1P07384 RARRES2P11-201ENST00000635158 484 ntBASIC20.6■□□□□ 0.89
CAPN1P07384 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN1P07384 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.6■□□□□ 0.89
CAPN1P07384 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN1P07384 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CAPN1P07384 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.59■□□□□ 0.89
CAPN1P07384 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN1P07384 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN1P07384 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.59■□□□□ 0.89
CAPN1P07384 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CAPN1P07384 SMUG1P1-201ENST00000590640 811 ntBASIC20.59■□□□□ 0.89
CAPN1P07384 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.59■□□□□ 0.89
CAPN1P07384 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CAPN1P07384 AL024507.2-201ENST00000606070 2574 ntBASIC20.59■□□□□ 0.89
CAPN1P07384 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.59■□□□□ 0.89
CAPN1P07384 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN1P07384 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN1P07384 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN1P07384 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN1P07384 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms