Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.99■■□□□ 1.75
COL4A1P02462 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL4A1P02462 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
COL4A1P02462 AC092053.2-201ENST00000640557 1818 ntBASIC25.98■■□□□ 1.75
COL4A1P02462 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.98■■□□□ 1.75
COL4A1P02462 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.98■■□□□ 1.75
COL4A1P02462 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL4A1P02462 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL4A1P02462 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
COL4A1P02462 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC25.98■■□□□ 1.75
COL4A1P02462 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.98■■□□□ 1.75
COL4A1P02462 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.98■■□□□ 1.75
COL4A1P02462 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.98■■□□□ 1.75
COL4A1P02462 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.98■■□□□ 1.75
COL4A1P02462 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.98■■□□□ 1.75
COL4A1P02462 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL4A1P02462 GAS7-202ENST00000396115 929 ntTSL 5 BASIC25.97■■□□□ 1.75
COL4A1P02462 ADM-205ENST00000528544 586 ntTSL 2 BASIC25.97■■□□□ 1.75
COL4A1P02462 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.97■■□□□ 1.75
COL4A1P02462 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL4A1P02462 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL4A1P02462 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL4A1P02462 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
COL4A1P02462 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
COL4A1P02462 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL4A1P02462 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL4A1P02462 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL4A1P02462 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.96■■□□□ 1.75
COL4A1P02462 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL4A1P02462 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
COL4A1P02462 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL4A1P02462 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL4A1P02462 AC120498.10-201ENST00000621827 505 ntBASIC25.96■■□□□ 1.75
COL4A1P02462 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.96■■□□□ 1.75
COL4A1P02462 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.96■■□□□ 1.75
COL4A1P02462 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL4A1P02462 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
COL4A1P02462 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.95■■□□□ 1.75
COL4A1P02462 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.95■■□□□ 1.74
COL4A1P02462 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC25.95■■□□□ 1.74
COL4A1P02462 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
COL4A1P02462 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.95■■□□□ 1.74
COL4A1P02462 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL4A1P02462 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.94■■□□□ 1.74
COL4A1P02462 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL4A1P02462 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL4A1P02462 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
COL4A1P02462 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL4A1P02462 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
COL4A1P02462 AL591742.1-201ENST00000604433 565 ntBASIC25.94■■□□□ 1.74
COL4A1P02462 INO80E-214ENST00000620599 515 ntTSL 2 BASIC25.94■■□□□ 1.74
COL4A1P02462 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL4A1P02462 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
COL4A1P02462 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.94■■□□□ 1.74
COL4A1P02462 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.94■■□□□ 1.74
COL4A1P02462 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL4A1P02462 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC25.94■■□□□ 1.74
COL4A1P02462 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.94■■□□□ 1.74
COL4A1P02462 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.94■■□□□ 1.74
COL4A1P02462 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
COL4A1P02462 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL4A1P02462 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL4A1P02462 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.93■■□□□ 1.74
COL4A1P02462 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL4A1P02462 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.93■■□□□ 1.74
COL4A1P02462 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL4A1P02462 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.93■■□□□ 1.74
COL4A1P02462 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
COL4A1P02462 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL4A1P02462 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
COL4A1P02462 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC25.93■■□□□ 1.74
COL4A1P02462 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.93■■□□□ 1.74
COL4A1P02462 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC25.93■■□□□ 1.74
COL4A1P02462 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
COL4A1P02462 AC008694.1-202ENST00000636953 945 ntBASIC25.93■■□□□ 1.74
COL4A1P02462 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
COL4A1P02462 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL4A1P02462 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.92■■□□□ 1.74
COL4A1P02462 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL4A1P02462 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC25.92■■□□□ 1.74
COL4A1P02462 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC25.92■■□□□ 1.74
COL4A1P02462 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL4A1P02462 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL4A1P02462 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.92■■□□□ 1.74
COL4A1P02462 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
COL4A1P02462 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A1P02462 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A1P02462 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A1P02462 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A1P02462 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A1P02462 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A1P02462 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A1P02462 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.91■■□□□ 1.74
COL4A1P02462 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.91■■□□□ 1.74
COL4A1P02462 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL4A1P02462 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
COL4A1P02462 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.91■■□□□ 1.74
COL4A1P02462 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC25.91■■□□□ 1.74
COL4A1P02462 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.91■■□□□ 1.74
COL4A1P02462 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms