Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBC1P01850 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBC1P01850 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRBC1P01850 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBC1P01850 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.11■□□□□ 0.97
TRBC1P01850 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBC1P01850 IKBKGP1-201ENST00000612193 1073 ntBASIC21.11■□□□□ 0.97
TRBC1P01850 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBC1P01850 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBC1P01850 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBC1P01850 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBC1P01850 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBC1P01850 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBC1P01850 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBC1P01850 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRBC1P01850 AC016769.1-201ENST00000409132 1010 ntBASIC21.1■□□□□ 0.97
TRBC1P01850 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.1■□□□□ 0.97
TRBC1P01850 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBC1P01850 SLC7A5P2-201ENST00000553010 536 ntBASIC21.1■□□□□ 0.97
TRBC1P01850 UBE2DNL-204ENST00000602536 740 ntBASIC21.1■□□□□ 0.97
TRBC1P01850 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.1■□□□□ 0.97
TRBC1P01850 AC092437.1-201ENST00000624794 1048 ntBASIC21.1■□□□□ 0.97
TRBC1P01850 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.1■□□□□ 0.97
TRBC1P01850 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.1■□□□□ 0.97
TRBC1P01850 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBC1P01850 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.1■□□□□ 0.97
TRBC1P01850 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBC1P01850 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
TRBC1P01850 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
TRBC1P01850 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.09■□□□□ 0.97
TRBC1P01850 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 KRT18P11-201ENST00000435214 1283 ntBASIC21.09■□□□□ 0.97
TRBC1P01850 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.09■□□□□ 0.97
TRBC1P01850 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.09■□□□□ 0.97
TRBC1P01850 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TRBC1P01850 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRBC1P01850 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRBC1P01850 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRBC1P01850 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBC1P01850 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBC1P01850 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBC1P01850 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBC1P01850 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBC1P01850 KRT16P2-201ENST00000414673 1423 ntBASIC21.08■□□□□ 0.97
TRBC1P01850 AC092666.2-201ENST00000613287 246 ntBASIC21.08■□□□□ 0.97
TRBC1P01850 AC120498.10-201ENST00000621827 505 ntBASIC21.08■□□□□ 0.97
TRBC1P01850 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBC1P01850 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBC1P01850 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.08■□□□□ 0.96
TRBC1P01850 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TRBC1P01850 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBC1P01850 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.07■□□□□ 0.96
TRBC1P01850 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 Z98882.1-201ENST00000622160 2253 ntBASIC21.07■□□□□ 0.96
TRBC1P01850 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.07■□□□□ 0.96
TRBC1P01850 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.07■□□□□ 0.96
TRBC1P01850 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TRBC1P01850 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRBC1P01850 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TRBC1P01850 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBC1P01850 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TRBC1P01850 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBC1P01850 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.06■□□□□ 0.96
TRBC1P01850 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBC1P01850 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.06■□□□□ 0.96
TRBC1P01850 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.06■□□□□ 0.96
TRBC1P01850 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TRBC1P01850 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TRBC1P01850 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRBC1P01850 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.06■□□□□ 0.96
TRBC1P01850 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.06■□□□□ 0.96
TRBC1P01850 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.06■□□□□ 0.96
TRBC1P01850 SLC7A5P1-201ENST00000568957 537 ntBASIC21.06■□□□□ 0.96
TRBC1P01850 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.06■□□□□ 0.96
TRBC1P01850 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms