Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
GGPS1O95749 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
GGPS1O95749 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
GGPS1O95749 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
GGPS1O95749 AC098934.4-201ENST00000564127 592 ntBASIC23.68■■□□□ 1.38
GGPS1O95749 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
GGPS1O95749 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
GGPS1O95749 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
GGPS1O95749 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
GGPS1O95749 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.68■■□□□ 1.38
GGPS1O95749 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
GGPS1O95749 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
GGPS1O95749 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
GGPS1O95749 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
GGPS1O95749 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 AC010542.4-201ENST00000563151 1910 ntBASIC23.67■■□□□ 1.38
GGPS1O95749 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 AC069152.1-201ENST00000438030 544 ntBASIC23.67■■□□□ 1.38
GGPS1O95749 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 CD99P1-205ENST00000527459 561 ntBASIC23.67■■□□□ 1.38
GGPS1O95749 AC016405.3-201ENST00000607710 860 ntBASIC23.67■■□□□ 1.38
GGPS1O95749 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
GGPS1O95749 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GGPS1O95749 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
GGPS1O95749 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
GGPS1O95749 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
GGPS1O95749 FAM99A-202ENST00000538190 1989 ntBASIC23.66■■□□□ 1.38
GGPS1O95749 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GGPS1O95749 ABHD17AP1-201ENST00000358206 933 ntBASIC23.66■■□□□ 1.38
GGPS1O95749 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
GGPS1O95749 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
GGPS1O95749 AC093787.1-201ENST00000450396 207 ntBASIC23.66■■□□□ 1.38
GGPS1O95749 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
GGPS1O95749 AC069236.1-201ENST00000604339 616 ntBASIC23.66■■□□□ 1.38
GGPS1O95749 OR10C1-204ENST00000622521 1039 ntBASIC23.66■■□□□ 1.38
GGPS1O95749 AC008694.1-202ENST00000636953 945 ntBASIC23.66■■□□□ 1.38
GGPS1O95749 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
GGPS1O95749 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GGPS1O95749 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
GGPS1O95749 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
GGPS1O95749 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
GGPS1O95749 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
GGPS1O95749 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
GGPS1O95749 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GGPS1O95749 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.65■■□□□ 1.38
GGPS1O95749 MKRN4P-201ENST00000444706 1521 ntBASIC23.65■■□□□ 1.38
GGPS1O95749 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
GGPS1O95749 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
GGPS1O95749 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.65■■□□□ 1.38
GGPS1O95749 KRT18P6-201ENST00000555540 1265 ntBASIC23.65■■□□□ 1.38
GGPS1O95749 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.65■■□□□ 1.38
GGPS1O95749 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.65■■□□□ 1.38
GGPS1O95749 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.65■■□□□ 1.38
GGPS1O95749 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.65■■□□□ 1.38
GGPS1O95749 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
GGPS1O95749 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GGPS1O95749 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.65■■□□□ 1.38
GGPS1O95749 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
GGPS1O95749 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.38
GGPS1O95749 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
GGPS1O95749 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
GGPS1O95749 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
GGPS1O95749 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
GGPS1O95749 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
GGPS1O95749 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
GGPS1O95749 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.64■■□□□ 1.37
GGPS1O95749 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.64■■□□□ 1.37
GGPS1O95749 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
GGPS1O95749 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
GGPS1O95749 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.64■■□□□ 1.37
GGPS1O95749 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.64■■□□□ 1.37
GGPS1O95749 AC133041.1-202ENST00000642053 222 ntBASIC23.64■■□□□ 1.37
GGPS1O95749 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
GGPS1O95749 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.64■■□□□ 1.37
GGPS1O95749 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
GGPS1O95749 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
GGPS1O95749 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
GGPS1O95749 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.63■■□□□ 1.37
GGPS1O95749 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.63■■□□□ 1.37
GGPS1O95749 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
GGPS1O95749 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
GGPS1O95749 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
GGPS1O95749 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
GGPS1O95749 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
GGPS1O95749 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
GGPS1O95749 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
GGPS1O95749 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.63■■□□□ 1.37
GGPS1O95749 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.63■■□□□ 1.37
GGPS1O95749 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.63■■□□□ 1.37
GGPS1O95749 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.63■■□□□ 1.37
GGPS1O95749 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
GGPS1O95749 AC243732.1-201ENST00000612648 864 ntBASIC23.63■■□□□ 1.37
GGPS1O95749 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.63■■□□□ 1.37
GGPS1O95749 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms