Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
CTNSO60931 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNSO60931 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTNSO60931 AC061975.6-201ENST00000579045 1553 ntBASIC19.74■□□□□ 0.75
CTNSO60931 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.74■□□□□ 0.75
CTNSO60931 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNSO60931 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNSO60931 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.74■□□□□ 0.75
CTNSO60931 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CTNSO60931 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNSO60931 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.74■□□□□ 0.75
CTNSO60931 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.74■□□□□ 0.75
CTNSO60931 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.74■□□□□ 0.75
CTNSO60931 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNSO60931 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNSO60931 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.74■□□□□ 0.75
CTNSO60931 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNSO60931 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNSO60931 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CTNSO60931 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNSO60931 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNSO60931 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
CTNSO60931 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CTNSO60931 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CTNSO60931 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.73■□□□□ 0.75
CTNSO60931 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 KRT18P11-201ENST00000435214 1283 ntBASIC19.73■□□□□ 0.75
CTNSO60931 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.73■□□□□ 0.75
CTNSO60931 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.73■□□□□ 0.75
CTNSO60931 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.73■□□□□ 0.75
CTNSO60931 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CTNSO60931 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTNSO60931 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNSO60931 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNSO60931 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.72■□□□□ 0.75
CTNSO60931 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTNSO60931 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNSO60931 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNSO60931 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNSO60931 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNSO60931 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNSO60931 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNSO60931 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTNSO60931 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.72■□□□□ 0.75
CTNSO60931 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.72■□□□□ 0.75
CTNSO60931 AC016769.1-201ENST00000409132 1010 ntBASIC19.72■□□□□ 0.75
CTNSO60931 SLC7A5P2-201ENST00000553010 536 ntBASIC19.72■□□□□ 0.75
CTNSO60931 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.72■□□□□ 0.75
CTNSO60931 SLC7A5P1-201ENST00000568957 537 ntBASIC19.72■□□□□ 0.75
CTNSO60931 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CTNSO60931 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNSO60931 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNSO60931 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNSO60931 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNSO60931 KRT16P2-201ENST00000414673 1423 ntBASIC19.71■□□□□ 0.75
CTNSO60931 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNSO60931 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNSO60931 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CTNSO60931 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNSO60931 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNSO60931 AC006015.1-201ENST00000429970 570 ntBASIC19.71■□□□□ 0.75
CTNSO60931 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.71■□□□□ 0.75
CTNSO60931 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNSO60931 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNSO60931 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.71■□□□□ 0.75
CTNSO60931 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNSO60931 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNSO60931 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNSO60931 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.71■□□□□ 0.75
CTNSO60931 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CTNSO60931 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNSO60931 Z98882.1-201ENST00000622160 2253 ntBASIC19.71■□□□□ 0.75
CTNSO60931 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTNSO60931 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CTNSO60931 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.7■□□□□ 0.74
CTNSO60931 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 UBE2DNL-204ENST00000602536 740 ntBASIC19.7■□□□□ 0.74
CTNSO60931 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.7■□□□□ 0.74
CTNSO60931 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.7■□□□□ 0.74
CTNSO60931 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNSO60931 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.69■□□□□ 0.74
CTNSO60931 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms