Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSSCA1O60232 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.1■□□□□ 0.33
SSSCA1O60232 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.1■□□□□ 0.33
SSSCA1O60232 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.1■□□□□ 0.33
SSSCA1O60232 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.1■□□□□ 0.33
SSSCA1O60232 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.1■□□□□ 0.33
SSSCA1O60232 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.1■□□□□ 0.33
SSSCA1O60232 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
SSSCA1O60232 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.1■□□□□ 0.33
SSSCA1O60232 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.1■□□□□ 0.33
SSSCA1O60232 AC006128.1-201ENST00000624704 1661 ntBASIC17.1■□□□□ 0.33
SSSCA1O60232 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSSCA1O60232 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.1■□□□□ 0.33
SSSCA1O60232 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.1■□□□□ 0.33
SSSCA1O60232 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.09■□□□□ 0.33
SSSCA1O60232 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SSSCA1O60232 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSSCA1O60232 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SSSCA1O60232 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSSCA1O60232 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.09■□□□□ 0.33
SSSCA1O60232 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SSSCA1O60232 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSSCA1O60232 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.09■□□□□ 0.33
SSSCA1O60232 MTDHP2-201ENST00000601468 714 ntBASIC17.09■□□□□ 0.33
SSSCA1O60232 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSSCA1O60232 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSSCA1O60232 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.09■□□□□ 0.33
SSSCA1O60232 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.09■□□□□ 0.33
SSSCA1O60232 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSSCA1O60232 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSSCA1O60232 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSSCA1O60232 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.09■□□□□ 0.33
SSSCA1O60232 AFG3L1P-217ENST00000557444 2447 ntBASIC17.09■□□□□ 0.33
SSSCA1O60232 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSSCA1O60232 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.08■□□□□ 0.33
SSSCA1O60232 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSSCA1O60232 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSSCA1O60232 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SSSCA1O60232 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SSSCA1O60232 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.08■□□□□ 0.32
SSSCA1O60232 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
SSSCA1O60232 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
SSSCA1O60232 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.08■□□□□ 0.32
SSSCA1O60232 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.08■□□□□ 0.32
SSSCA1O60232 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.08■□□□□ 0.32
SSSCA1O60232 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SSSCA1O60232 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSSCA1O60232 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSSCA1O60232 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SSSCA1O60232 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSSCA1O60232 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSSCA1O60232 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSSCA1O60232 AC133637.1-201ENST00000624115 1537 ntBASIC17.07■□□□□ 0.32
SSSCA1O60232 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSSCA1O60232 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSSCA1O60232 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.07■□□□□ 0.32
SSSCA1O60232 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
SSSCA1O60232 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.07■□□□□ 0.32
SSSCA1O60232 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.07■□□□□ 0.32
SSSCA1O60232 AL451085.2-201ENST00000605085 799 ntBASIC17.07■□□□□ 0.32
SSSCA1O60232 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SSSCA1O60232 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.07■□□□□ 0.32
SSSCA1O60232 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSSCA1O60232 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSSCA1O60232 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SSSCA1O60232 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSSCA1O60232 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SSSCA1O60232 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.07■□□□□ 0.32
SSSCA1O60232 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.07■□□□□ 0.32
SSSCA1O60232 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.07■□□□□ 0.32
SSSCA1O60232 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SSSCA1O60232 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SSSCA1O60232 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms