Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.7■□□□□ 0.9
VEGFDO43915 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.7■□□□□ 0.9
VEGFDO43915 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.7■□□□□ 0.9
VEGFDO43915 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFDO43915 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFDO43915 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFDO43915 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VEGFDO43915 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VEGFDO43915 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
VEGFDO43915 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.69■□□□□ 0.9
VEGFDO43915 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VEGFDO43915 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VEGFDO43915 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VEGFDO43915 AC010536.3-201ENST00000620306 533 ntBASIC20.69■□□□□ 0.9
VEGFDO43915 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VEGFDO43915 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VEGFDO43915 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.69■□□□□ 0.9
VEGFDO43915 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.69■□□□□ 0.9
VEGFDO43915 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VEGFDO43915 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VEGFDO43915 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VEGFDO43915 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VEGFDO43915 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VEGFDO43915 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VEGFDO43915 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.68■□□□□ 0.9
VEGFDO43915 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VEGFDO43915 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.68■□□□□ 0.9
VEGFDO43915 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VEGFDO43915 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
VEGFDO43915 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.68■□□□□ 0.9
VEGFDO43915 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.68■□□□□ 0.9
VEGFDO43915 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VEGFDO43915 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
VEGFDO43915 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VEGFDO43915 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VEGFDO43915 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.67■□□□□ 0.9
VEGFDO43915 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VEGFDO43915 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VEGFDO43915 FBXW4P1-201ENST00000426721 2239 ntBASIC20.67■□□□□ 0.9
VEGFDO43915 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.67■□□□□ 0.9
VEGFDO43915 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
VEGFDO43915 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VEGFDO43915 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VEGFDO43915 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.67■□□□□ 0.9
VEGFDO43915 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VEGFDO43915 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.66■□□□□ 0.9
VEGFDO43915 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.66■□□□□ 0.9
VEGFDO43915 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 DUX4L16-201ENST00000555130 1264 ntBASIC20.66■□□□□ 0.9
VEGFDO43915 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.66■□□□□ 0.9
VEGFDO43915 RARRES2P11-201ENST00000635158 484 ntBASIC20.66■□□□□ 0.9
VEGFDO43915 AC073111.5-205ENST00000641717 521 ntBASIC20.66■□□□□ 0.9
VEGFDO43915 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VEGFDO43915 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VEGFDO43915 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.65■□□□□ 0.9
VEGFDO43915 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.65■□□□□ 0.9
VEGFDO43915 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VEGFDO43915 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VEGFDO43915 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
VEGFDO43915 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VEGFDO43915 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.65■□□□□ 0.9
VEGFDO43915 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VEGFDO43915 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.65■□□□□ 0.9
VEGFDO43915 AC243732.1-201ENST00000612648 864 ntBASIC20.65■□□□□ 0.9
VEGFDO43915 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
VEGFDO43915 AC231657.2-201ENST00000624556 255 ntBASIC20.65■□□□□ 0.9
VEGFDO43915 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.65■□□□□ 0.9
VEGFDO43915 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VEGFDO43915 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VEGFDO43915 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VEGFDO43915 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VEGFDO43915 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VEGFDO43915 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VEGFDO43915 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VEGFDO43915 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
VEGFDO43915 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
VEGFDO43915 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.64■□□□□ 0.89
VEGFDO43915 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.64■□□□□ 0.89
VEGFDO43915 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.64■□□□□ 0.89
VEGFDO43915 CDCA4P2-201ENST00000441182 718 ntBASIC20.64■□□□□ 0.89
VEGFDO43915 TERF1P5-201ENST00000477545 1207 ntBASIC20.64■□□□□ 0.89
VEGFDO43915 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.64■□□□□ 0.89
VEGFDO43915 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.64■□□□□ 0.89
VEGFDO43915 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.64■□□□□ 0.89
VEGFDO43915 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.64■□□□□ 0.89
VEGFDO43915 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VEGFDO43915 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VEGFDO43915 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.64■□□□□ 0.89
VEGFDO43915 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.64■□□□□ 0.89
VEGFDO43915 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms