Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.04■□□□□ 0.96
TSPAN6O43657 AC007322.4-201ENST00000509611 723 ntBASIC21.04■□□□□ 0.96
TSPAN6O43657 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 AL121832.2-201ENST00000610979 668 ntBASIC21.04■□□□□ 0.96
TSPAN6O43657 AL050303.2-201ENST00000619798 666 ntBASIC21.04■□□□□ 0.96
TSPAN6O43657 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.04■□□□□ 0.96
TSPAN6O43657 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TSPAN6O43657 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.03■□□□□ 0.96
TSPAN6O43657 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN6O43657 AC061975.6-201ENST00000579045 1553 ntBASIC21.03■□□□□ 0.96
TSPAN6O43657 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN6O43657 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TSPAN6O43657 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN6O43657 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN6O43657 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN6O43657 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.03■□□□□ 0.96
TSPAN6O43657 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.03■□□□□ 0.96
TSPAN6O43657 AC010542.4-201ENST00000563151 1910 ntBASIC21.03■□□□□ 0.96
TSPAN6O43657 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN6O43657 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN6O43657 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.03■□□□□ 0.96
TSPAN6O43657 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TSPAN6O43657 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN6O43657 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.02■□□□□ 0.96
TSPAN6O43657 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
TSPAN6O43657 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN6O43657 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TSPAN6O43657 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
TSPAN6O43657 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.02■□□□□ 0.96
TSPAN6O43657 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.02■□□□□ 0.96
TSPAN6O43657 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.02■□□□□ 0.96
TSPAN6O43657 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.02■□□□□ 0.96
TSPAN6O43657 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.02■□□□□ 0.96
TSPAN6O43657 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.02■□□□□ 0.96
TSPAN6O43657 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.02■□□□□ 0.96
TSPAN6O43657 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.02■□□□□ 0.96
TSPAN6O43657 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TSPAN6O43657 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
TSPAN6O43657 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TSPAN6O43657 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
TSPAN6O43657 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN6O43657 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN6O43657 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TSPAN6O43657 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.01■□□□□ 0.95
TSPAN6O43657 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN6O43657 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN6O43657 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN6O43657 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.01■□□□□ 0.95
TSPAN6O43657 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.01■□□□□ 0.95
TSPAN6O43657 AC083906.2-201ENST00000511578 360 ntBASIC21.01■□□□□ 0.95
TSPAN6O43657 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TSPAN6O43657 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TSPAN6O43657 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN6O43657 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN6O43657 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSPAN6O43657 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21■□□□□ 0.95
TSPAN6O43657 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TSPAN6O43657 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TSPAN6O43657 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21■□□□□ 0.95
TSPAN6O43657 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 AC133552.2-202ENST00000575694 574 ntBASIC21■□□□□ 0.95
TSPAN6O43657 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21■□□□□ 0.95
TSPAN6O43657 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TSPAN6O43657 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSPAN6O43657 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.99■□□□□ 0.95
TSPAN6O43657 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.99■□□□□ 0.95
TSPAN6O43657 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN6O43657 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
TSPAN6O43657 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN6O43657 RBM17P2-201ENST00000616397 1405 ntBASIC20.99■□□□□ 0.95
TSPAN6O43657 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN6O43657 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.99■□□□□ 0.95
TSPAN6O43657 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.99■□□□□ 0.95
TSPAN6O43657 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.99■□□□□ 0.95
TSPAN6O43657 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.99■□□□□ 0.95
TSPAN6O43657 AC243732.1-201ENST00000612648 864 ntBASIC20.99■□□□□ 0.95
TSPAN6O43657 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN6O43657 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN6O43657 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN6O43657 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN6O43657 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN6O43657 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSPAN6O43657 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN6O43657 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN6O43657 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms