Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.1■□□□□ 0.49
PHF1O43189 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PHF1O43189 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.1■□□□□ 0.49
PHF1O43189 AC006970.2-201ENST00000450065 779 ntBASIC18.1■□□□□ 0.49
PHF1O43189 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.1■□□□□ 0.49
PHF1O43189 AC137761.2-201ENST00000561729 223 ntBASIC18.1■□□□□ 0.49
PHF1O43189 AC145350.3-201ENST00000569033 163 ntBASIC18.1■□□□□ 0.49
PHF1O43189 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.1■□□□□ 0.49
PHF1O43189 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.1■□□□□ 0.49
PHF1O43189 AL109923.1-201ENST00000618799 583 ntBASIC18.1■□□□□ 0.49
PHF1O43189 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.1■□□□□ 0.49
PHF1O43189 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHF1O43189 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.09■□□□□ 0.49
PHF1O43189 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PHF1O43189 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHF1O43189 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PHF1O43189 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHF1O43189 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHF1O43189 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.09■□□□□ 0.49
PHF1O43189 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.09■□□□□ 0.49
PHF1O43189 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PHF1O43189 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHF1O43189 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.09■□□□□ 0.49
PHF1O43189 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.09■□□□□ 0.49
PHF1O43189 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHF1O43189 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
PHF1O43189 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHF1O43189 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHF1O43189 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.08■□□□□ 0.49
PHF1O43189 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHF1O43189 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PHF1O43189 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.08■□□□□ 0.48
PHF1O43189 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.08■□□□□ 0.48
PHF1O43189 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PHF1O43189 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PHF1O43189 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.08■□□□□ 0.48
PHF1O43189 LINC01960-201ENST00000563759 1884 ntBASIC18.07■□□□□ 0.48
PHF1O43189 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.07■□□□□ 0.48
PHF1O43189 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHF1O43189 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.07■□□□□ 0.48
PHF1O43189 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHF1O43189 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHF1O43189 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.07■□□□□ 0.48
PHF1O43189 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.07■□□□□ 0.48
PHF1O43189 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.07■□□□□ 0.48
PHF1O43189 CD99P1-205ENST00000527459 561 ntBASIC18.07■□□□□ 0.48
PHF1O43189 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.07■□□□□ 0.48
PHF1O43189 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.07■□□□□ 0.48
PHF1O43189 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PHF1O43189 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.07■□□□□ 0.48
PHF1O43189 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.07■□□□□ 0.48
PHF1O43189 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.06■□□□□ 0.48
PHF1O43189 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.06■□□□□ 0.48
PHF1O43189 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PHF1O43189 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.06■□□□□ 0.48
PHF1O43189 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.06■□□□□ 0.48
PHF1O43189 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.06■□□□□ 0.48
PHF1O43189 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.06■□□□□ 0.48
PHF1O43189 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.06■□□□□ 0.48
PHF1O43189 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.06■□□□□ 0.48
PHF1O43189 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.06■□□□□ 0.48
PHF1O43189 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PHF1O43189 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHF1O43189 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PHF1O43189 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PHF1O43189 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PHF1O43189 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PHF1O43189 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHF1O43189 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHF1O43189 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PHF1O43189 OXCT2P1-201ENST00000447263 1535 ntBASIC18.05■□□□□ 0.48
PHF1O43189 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHF1O43189 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.05■□□□□ 0.48
PHF1O43189 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.05■□□□□ 0.48
PHF1O43189 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PHF1O43189 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHF1O43189 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.05■□□□□ 0.48
PHF1O43189 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PHF1O43189 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.05■□□□□ 0.48
PHF1O43189 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms