Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
NDUFS4O43181 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NDUFS4O43181 KRT18P5-201ENST00000436075 1291 ntBASIC20.16■□□□□ 0.82
NDUFS4O43181 AL162430.1-201ENST00000480705 870 ntBASIC20.16■□□□□ 0.82
NDUFS4O43181 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 KRT18P61-201ENST00000585825 1298 ntBASIC20.16■□□□□ 0.82
NDUFS4O43181 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NDUFS4O43181 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.16■□□□□ 0.82
NDUFS4O43181 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.16■□□□□ 0.82
NDUFS4O43181 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 AC026310.3-201ENST00000625186 2373 ntBASIC20.15■□□□□ 0.82
NDUFS4O43181 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.15■□□□□ 0.82
NDUFS4O43181 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NDUFS4O43181 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.15■□□□□ 0.82
NDUFS4O43181 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.15■□□□□ 0.82
NDUFS4O43181 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.15■□□□□ 0.82
NDUFS4O43181 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NDUFS4O43181 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.15■□□□□ 0.82
NDUFS4O43181 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NDUFS4O43181 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NDUFS4O43181 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NDUFS4O43181 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFS4O43181 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFS4O43181 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFS4O43181 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
NDUFS4O43181 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
NDUFS4O43181 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
NDUFS4O43181 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.14■□□□□ 0.81
NDUFS4O43181 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFS4O43181 KRT19P1-201ENST00000405746 1186 ntBASIC20.14■□□□□ 0.81
NDUFS4O43181 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.14■□□□□ 0.81
NDUFS4O43181 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFS4O43181 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
NDUFS4O43181 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFS4O43181 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.14■□□□□ 0.81
NDUFS4O43181 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.13■□□□□ 0.81
NDUFS4O43181 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.13■□□□□ 0.81
NDUFS4O43181 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NDUFS4O43181 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.13■□□□□ 0.81
NDUFS4O43181 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NDUFS4O43181 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.13■□□□□ 0.81
NDUFS4O43181 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
NDUFS4O43181 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.13■□□□□ 0.81
NDUFS4O43181 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.13■□□□□ 0.81
NDUFS4O43181 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFS4O43181 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.13■□□□□ 0.81
NDUFS4O43181 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
NDUFS4O43181 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.12■□□□□ 0.81
NDUFS4O43181 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NDUFS4O43181 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NDUFS4O43181 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.12■□□□□ 0.81
NDUFS4O43181 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
NDUFS4O43181 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFS4O43181 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.12■□□□□ 0.81
NDUFS4O43181 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.12■□□□□ 0.81
NDUFS4O43181 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.12■□□□□ 0.81
NDUFS4O43181 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.12■□□□□ 0.81
NDUFS4O43181 AC138907.5-202ENST00000569484 235 ntBASIC20.12■□□□□ 0.81
NDUFS4O43181 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NDUFS4O43181 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NDUFS4O43181 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFS4O43181 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFS4O43181 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFS4O43181 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.11■□□□□ 0.81
NDUFS4O43181 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFS4O43181 AP001160.3-201ENST00000601484 763 ntBASIC20.11■□□□□ 0.81
NDUFS4O43181 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFS4O43181 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NDUFS4O43181 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
NDUFS4O43181 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms