Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPM1DO15297 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PPM1DO15297 LINC00565-201ENST00000562710 2331 ntBASIC20.5■□□□□ 0.87
PPM1DO15297 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PPM1DO15297 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PPM1DO15297 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PPM1DO15297 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
PPM1DO15297 C11orf96-202ENST00000528572 1834 ntBASIC20.49■□□□□ 0.87
PPM1DO15297 POU5F1P4-201ENST00000413175 1085 ntBASIC20.49■□□□□ 0.87
PPM1DO15297 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
PPM1DO15297 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.49■□□□□ 0.87
PPM1DO15297 GUSBP6-202ENST00000438529 1198 ntBASIC20.49■□□□□ 0.87
PPM1DO15297 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPM1DO15297 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.49■□□□□ 0.87
PPM1DO15297 AC013268.1-206ENST00000638368 961 ntBASIC20.49■□□□□ 0.87
PPM1DO15297 AC112229.1-201ENST00000639295 961 ntBASIC20.49■□□□□ 0.87
PPM1DO15297 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PPM1DO15297 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PPM1DO15297 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPM1DO15297 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PPM1DO15297 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.49■□□□□ 0.87
PPM1DO15297 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPM1DO15297 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PPM1DO15297 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.48■□□□□ 0.87
PPM1DO15297 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.48■□□□□ 0.87
PPM1DO15297 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PPM1DO15297 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.48■□□□□ 0.87
PPM1DO15297 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PPM1DO15297 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.48■□□□□ 0.87
PPM1DO15297 AC120498.10-201ENST00000621827 505 ntBASIC20.48■□□□□ 0.87
PPM1DO15297 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.48■□□□□ 0.87
PPM1DO15297 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 FAM99A-202ENST00000538190 1989 ntBASIC20.48■□□□□ 0.87
PPM1DO15297 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PPM1DO15297 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PPM1DO15297 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPM1DO15297 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PPM1DO15297 AC068338.2-201ENST00000563278 1430 ntBASIC20.47■□□□□ 0.87
PPM1DO15297 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PPM1DO15297 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPM1DO15297 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPM1DO15297 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.47■□□□□ 0.87
PPM1DO15297 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PPM1DO15297 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.47■□□□□ 0.87
PPM1DO15297 AC142086.2-201ENST00000569753 217 ntBASIC20.47■□□□□ 0.87
PPM1DO15297 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PPM1DO15297 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PPM1DO15297 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPM1DO15297 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPM1DO15297 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPM1DO15297 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PPM1DO15297 AC061975.6-201ENST00000579045 1553 ntBASIC20.46■□□□□ 0.87
PPM1DO15297 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PPM1DO15297 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.46■□□□□ 0.87
PPM1DO15297 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.46■□□□□ 0.87
PPM1DO15297 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPM1DO15297 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPM1DO15297 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPM1DO15297 AF201337.1-201ENST00000520239 748 ntBASIC20.46■□□□□ 0.87
PPM1DO15297 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PPM1DO15297 AC133552.2-202ENST00000575694 574 ntBASIC20.46■□□□□ 0.87
PPM1DO15297 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PPM1DO15297 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.46■□□□□ 0.87
PPM1DO15297 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PPM1DO15297 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
PPM1DO15297 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PPM1DO15297 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.46■□□□□ 0.87
PPM1DO15297 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.46■□□□□ 0.87
PPM1DO15297 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.45■□□□□ 0.87
PPM1DO15297 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.45■□□□□ 0.87
PPM1DO15297 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.45■□□□□ 0.86
PPM1DO15297 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPM1DO15297 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPM1DO15297 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPM1DO15297 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PPM1DO15297 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPM1DO15297 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.45■□□□□ 0.86
PPM1DO15297 AC105036.2-201ENST00000569468 176 ntBASIC20.45■□□□□ 0.86
PPM1DO15297 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.45■□□□□ 0.86
PPM1DO15297 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPM1DO15297 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PPM1DO15297 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPM1DO15297 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.45■□□□□ 0.86
PPM1DO15297 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PPM1DO15297 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPM1DO15297 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PPM1DO15297 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.44■□□□□ 0.86
PPM1DO15297 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPM1DO15297 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPM1DO15297 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPM1DO15297 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PPM1DO15297 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms