Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.4■□□□□ 0.7
TO15178 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
TO15178 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TO15178 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TO15178 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.39■□□□□ 0.7
TO15178 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.39■□□□□ 0.69
TO15178 Z98882.1-201ENST00000622160 2253 ntBASIC19.39■□□□□ 0.69
TO15178 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TO15178 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.39■□□□□ 0.69
TO15178 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TO15178 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.39■□□□□ 0.69
TO15178 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TO15178 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TO15178 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.39■□□□□ 0.69
TO15178 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TO15178 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TO15178 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.38■□□□□ 0.69
TO15178 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.38■□□□□ 0.69
TO15178 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.38■□□□□ 0.69
TO15178 KRT16P2-201ENST00000414673 1423 ntBASIC19.38■□□□□ 0.69
TO15178 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.38■□□□□ 0.69
TO15178 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.38■□□□□ 0.69
TO15178 SLC7A5P1-201ENST00000568957 537 ntBASIC19.38■□□□□ 0.69
TO15178 AC061975.6-201ENST00000579045 1553 ntBASIC19.38■□□□□ 0.69
TO15178 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.38■□□□□ 0.69
TO15178 AC120498.10-201ENST00000621827 505 ntBASIC19.38■□□□□ 0.69
TO15178 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TO15178 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TO15178 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.37■□□□□ 0.69
TO15178 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TO15178 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TO15178 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TO15178 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.37■□□□□ 0.69
TO15178 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.37■□□□□ 0.69
TO15178 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.37■□□□□ 0.69
TO15178 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TO15178 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.36■□□□□ 0.69
TO15178 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.36■□□□□ 0.69
TO15178 KRT18P11-201ENST00000435214 1283 ntBASIC19.36■□□□□ 0.69
TO15178 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.36■□□□□ 0.69
TO15178 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.36■□□□□ 0.69
TO15178 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.36■□□□□ 0.69
TO15178 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.36■□□□□ 0.69
TO15178 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TO15178 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TO15178 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.35■□□□□ 0.69
TO15178 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TO15178 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TO15178 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TO15178 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.35■□□□□ 0.69
TO15178 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TO15178 AC006015.1-201ENST00000429970 570 ntBASIC19.35■□□□□ 0.69
TO15178 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.35■□□□□ 0.69
TO15178 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.35■□□□□ 0.69
TO15178 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.35■□□□□ 0.69
TO15178 AC137761.2-201ENST00000561729 223 ntBASIC19.35■□□□□ 0.69
TO15178 AC145350.3-201ENST00000569033 163 ntBASIC19.35■□□□□ 0.69
TO15178 AC022517.1-201ENST00000592429 346 ntBASIC19.35■□□□□ 0.69
TO15178 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TO15178 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TO15178 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TO15178 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TO15178 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TO15178 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TO15178 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms