Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDN4O14493 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN4O14493 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN4O14493 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN4O14493 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLDN4O14493 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN4O14493 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN4O14493 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN4O14493 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN4O14493 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN4O14493 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN4O14493 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN4O14493 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN4O14493 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN4O14493 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN4O14493 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN4O14493 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.8■□□□□ 0.76
CLDN4O14493 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN4O14493 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN4O14493 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLDN4O14493 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN4O14493 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN4O14493 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN4O14493 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN4O14493 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN4O14493 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN4O14493 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN4O14493 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN4O14493 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN4O14493 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN4O14493 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN4O14493 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN4O14493 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLDN4O14493 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN4O14493 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN4O14493 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN4O14493 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN4O14493 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN4O14493 AC092666.2-201ENST00000613287 246 ntBASIC19.78■□□□□ 0.76
CLDN4O14493 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CLDN4O14493 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN4O14493 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN4O14493 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN4O14493 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN4O14493 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN4O14493 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN4O14493 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN4O14493 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN4O14493 LINC00565-201ENST00000562710 2331 ntBASIC19.77■□□□□ 0.76
CLDN4O14493 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.77■□□□□ 0.76
CLDN4O14493 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN4O14493 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN4O14493 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN4O14493 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN4O14493 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN4O14493 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN4O14493 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN4O14493 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN4O14493 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN4O14493 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN4O14493 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN4O14493 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN4O14493 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN4O14493 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN4O14493 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN4O14493 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN4O14493 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN4O14493 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN4O14493 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN4O14493 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN4O14493 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN4O14493 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN4O14493 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN4O14493 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CLDN4O14493 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN4O14493 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN4O14493 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN4O14493 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN4O14493 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN4O14493 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN4O14493 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN4O14493 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms