Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC28A1O00337 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC28A1O00337 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC28A1O00337 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A1O00337 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A1O00337 AC096631.2-201ENST00000436136 790 ntBASIC20.23■□□□□ 0.83
SLC28A1O00337 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SLC28A1O00337 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC28A1O00337 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A1O00337 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC28A1O00337 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A1O00337 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A1O00337 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A1O00337 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.23■□□□□ 0.83
SLC28A1O00337 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SLC28A1O00337 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A1O00337 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A1O00337 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A1O00337 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SLC28A1O00337 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A1O00337 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A1O00337 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A1O00337 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SLC28A1O00337 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC28A1O00337 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC28A1O00337 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC28A1O00337 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
SLC28A1O00337 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SLC28A1O00337 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.22■□□□□ 0.83
SLC28A1O00337 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A1O00337 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A1O00337 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A1O00337 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC28A1O00337 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A1O00337 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SLC28A1O00337 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SLC28A1O00337 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SLC28A1O00337 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A1O00337 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC28A1O00337 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC28A1O00337 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC28A1O00337 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.21■□□□□ 0.83
SLC28A1O00337 AC106739.1-201ENST00000617035 715 ntBASIC20.21■□□□□ 0.83
SLC28A1O00337 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A1O00337 AC005224.4-201ENST00000583262 1652 ntBASIC20.21■□□□□ 0.83
SLC28A1O00337 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A1O00337 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A1O00337 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A1O00337 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A1O00337 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC28A1O00337 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLC28A1O00337 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLC28A1O00337 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC28A1O00337 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC28A1O00337 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC28A1O00337 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC28A1O00337 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLC28A1O00337 EDA-201ENST00000338901 1233 ntBASIC20.2■□□□□ 0.82
SLC28A1O00337 BX005040.4-201ENST00000637145 1518 ntBASIC20.2■□□□□ 0.82
SLC28A1O00337 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC28A1O00337 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SLC28A1O00337 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC28A1O00337 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC28A1O00337 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.19■□□□□ 0.82
SLC28A1O00337 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC28A1O00337 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
SLC28A1O00337 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC28A1O00337 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SLC28A1O00337 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A1O00337 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC28A1O00337 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC28A1O00337 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.18■□□□□ 0.82
SLC28A1O00337 AP001330.3-201ENST00000520123 633 ntBASIC20.18■□□□□ 0.82
SLC28A1O00337 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SLC28A1O00337 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC28A1O00337 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A1O00337 LINC01521-201ENST00000504184 1943 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms