Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.23■□□□□ 0.35
AP4M1O00189 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.23■□□□□ 0.35
AP4M1O00189 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
AP4M1O00189 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.22■□□□□ 0.35
AP4M1O00189 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4M1O00189 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AP4M1O00189 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.22■□□□□ 0.35
AP4M1O00189 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4M1O00189 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4M1O00189 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 MIR572-201ENST00000384983 95 ntBASIC17.22■□□□□ 0.35
AP4M1O00189 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.22■□□□□ 0.35
AP4M1O00189 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.22■□□□□ 0.35
AP4M1O00189 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP4M1O00189 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.21■□□□□ 0.35
AP4M1O00189 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4M1O00189 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4M1O00189 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP4M1O00189 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP4M1O00189 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4M1O00189 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.21■□□□□ 0.35
AP4M1O00189 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
AP4M1O00189 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4M1O00189 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP4M1O00189 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.21■□□□□ 0.34
AP4M1O00189 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP4M1O00189 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.2■□□□□ 0.34
AP4M1O00189 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4M1O00189 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4M1O00189 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.2■□□□□ 0.34
AP4M1O00189 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4M1O00189 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.2■□□□□ 0.34
AP4M1O00189 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.2■□□□□ 0.34
AP4M1O00189 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP4M1O00189 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4M1O00189 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.2■□□□□ 0.34
AP4M1O00189 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP4M1O00189 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4M1O00189 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP4M1O00189 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.2■□□□□ 0.34
AP4M1O00189 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.2■□□□□ 0.34
AP4M1O00189 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.2■□□□□ 0.34
AP4M1O00189 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
AP4M1O00189 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
AP4M1O00189 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
AP4M1O00189 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
AP4M1O00189 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
AP4M1O00189 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
AP4M1O00189 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
AP4M1O00189 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
AP4M1O00189 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP4M1O00189 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
AP4M1O00189 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.19■□□□□ 0.34
AP4M1O00189 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.19■□□□□ 0.34
AP4M1O00189 AL358852.1-201ENST00000623174 1268 ntBASIC17.19■□□□□ 0.34
AP4M1O00189 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.19■□□□□ 0.34
AP4M1O00189 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
AP4M1O00189 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP4M1O00189 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4M1O00189 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4M1O00189 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4M1O00189 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4M1O00189 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4M1O00189 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4M1O00189 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4M1O00189 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.18■□□□□ 0.34
AP4M1O00189 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4M1O00189 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4M1O00189 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.18■□□□□ 0.34
AP4M1O00189 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4M1O00189 AL354811.1-201ENST00000610286 706 ntBASIC17.18■□□□□ 0.34
AP4M1O00189 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms