Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF103-CHMP3A0A140T963 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF103-CHMP3A0A140T963 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF103-CHMP3A0A140T963 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
RNF103-CHMP3A0A140T963 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF103-CHMP3A0A140T963 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF103-CHMP3A0A140T963 LINC01006-201ENST00000333319 2292 ntBASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 AP005435.1-201ENST00000529293 1178 ntBASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF103-CHMP3A0A140T963 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF103-CHMP3A0A140T963 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 RNF165-205ENST00000588679 2904 ntBASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF103-CHMP3A0A140T963 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 AL034346.1-201ENST00000568244 1277 ntBASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 AC104564.3-201ENST00000582367 638 ntBASIC20.11■□□□□ 0.81
RNF103-CHMP3A0A140T963 AC131212.1-201ENST00000613771 668 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms