Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 SLC7A5P2-201ENST00000553010 536 ntBASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
IGHV4-28A0A0C4DH34 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 ECEL1P1-201ENST00000373592 1742 ntBASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 POU5F1P4-201ENST00000413175 1085 ntBASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC026185.1-201ENST00000445748 174 ntBASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
IGHV4-28A0A0C4DH34 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IGHV4-28A0A0C4DH34 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 AC006970.2-201ENST00000450065 779 ntBASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IGHV4-28A0A0C4DH34 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms