Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 AC105233.4-201ENST00000642045 216 ntBASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV27A0A087WT01 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 AP001330.3-201ENST00000520123 633 ntBASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 AC106739.1-201ENST00000617035 715 ntBASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV27A0A087WT01 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 AC009237.3-201ENST00000393279 1427 ntBASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV27A0A087WT01 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV27A0A087WT01 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV27A0A087WT01 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV27A0A087WT01 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV27A0A087WT01 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 AC055733.4-201ENST00000638462 1354 ntBASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV27A0A087WT01 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV27A0A087WT01 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV27A0A087WT01 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRAV27A0A087WT01 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
TRAV27A0A087WT01 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19■□□□□ 0.63
TRAV27A0A087WT01 AC110285.6-201ENST00000617652 491 ntBASIC19■□□□□ 0.63
TRAV27A0A087WT01 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV27A0A087WT01 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19■□□□□ 0.63
TRAV27A0A087WT01 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV27A0A087WT01 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19■□□□□ 0.63
TRAV27A0A087WT01 AC073130.3-201ENST00000624389 2278 ntBASIC19■□□□□ 0.63
TRAV27A0A087WT01 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19■□□□□ 0.63
TRAV27A0A087WT01 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 EDA-201ENST00000338901 1233 ntBASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.99■□□□□ 0.63
TRAV27A0A087WT01 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms