Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 AL136967.2-201ENST00000623968 743 ntBASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 AC105233.4-201ENST00000642045 216 ntBASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 RASA4CP-201ENST00000424092 1398 ntBASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 AL157384.1-201ENST00000445995 2473 ntBASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF11Q9Y3C5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF11Q9Y3C5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF11Q9Y3C5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF11Q9Y3C5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF11Q9Y3C5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 AC091305.1-201ENST00000479476 895 ntBASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 SUDS3P1-201ENST00000505831 966 ntBASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF11Q9Y3C5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 MIR572-201ENST00000384983 95 ntBASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 AL139246.5-201ENST00000606645 996 ntBASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF11Q9Y3C5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RNF11Q9Y3C5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF11Q9Y3C5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF11Q9Y3C5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF11Q9Y3C5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF11Q9Y3C5 AC009237.3-201ENST00000393279 1427 ntBASIC20.47■□□□□ 0.87
RNF11Q9Y3C5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms