Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1DQ9Y2S0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.77■□□□□ 0.59
POLR1DQ9Y2S0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR1DQ9Y2S0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR1DQ9Y2S0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 AP006587.3-201ENST00000525742 1516 ntBASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 AC133561.4-201ENST00000566112 224 ntBASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 AC105233.4-201ENST00000642045 216 ntBASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1DQ9Y2S0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 AC091305.1-201ENST00000479476 895 ntBASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR1DQ9Y2S0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 RASA4CP-201ENST00000424092 1398 ntBASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1DQ9Y2S0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 AC003102.1-202ENST00000563394 1796 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms