Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
FNDC3AQ9Y2H6 FAM99A-202ENST00000538190 1989 ntBASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 C11orf96-202ENST00000528572 1834 ntBASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FNDC3AQ9Y2H6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 KRT18P11-201ENST00000435214 1283 ntBASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 LINC00565-201ENST00000562710 2331 ntBASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FNDC3AQ9Y2H6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 AC079140.4-201ENST00000507448 529 ntBASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 AC026471.6-201ENST00000622954 1905 ntBASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.46■■□□□ 1.03
FNDC3AQ9Y2H6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.45■■□□□ 1.03
FNDC3AQ9Y2H6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
FNDC3AQ9Y2H6 AC079834.2-201ENST00000609776 1949 ntBASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 FBXW4P1-201ENST00000426721 2239 ntBASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FNDC3AQ9Y2H6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 GPX1P1-201ENST00000388829 606 ntBASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FNDC3AQ9Y2H6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FNDC3AQ9Y2H6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms