Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TERF1P1-201ENST00000311003 1181 ntBASIC34.21■■■■□ 3.07
RIMBP3Q9UFD9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC34.21■■■■□ 3.07
RIMBP3Q9UFD9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
RIMBP3Q9UFD9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC34.21■■■■□ 3.07
RIMBP3Q9UFD9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC34.21■■■■□ 3.07
RIMBP3Q9UFD9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC34.21■■■■□ 3.07
RIMBP3Q9UFD9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC34.21■■■■□ 3.07
RIMBP3Q9UFD9 AL023875.1-201ENST00000640777 796 ntBASIC34.21■■■■□ 3.07
RIMBP3Q9UFD9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
RIMBP3Q9UFD9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
RIMBP3Q9UFD9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.07
RIMBP3Q9UFD9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
RIMBP3Q9UFD9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC34.2■■■■□ 3.07
RIMBP3Q9UFD9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC34.2■■■■□ 3.07
RIMBP3Q9UFD9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.07
RIMBP3Q9UFD9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC34.2■■■■□ 3.06
RIMBP3Q9UFD9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC34.2■■■■□ 3.06
RIMBP3Q9UFD9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
RIMBP3Q9UFD9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
RIMBP3Q9UFD9 AP003071.4-201ENST00000562276 1284 ntBASIC34.19■■■■□ 3.06
RIMBP3Q9UFD9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC34.19■■■■□ 3.06
RIMBP3Q9UFD9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
RIMBP3Q9UFD9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC34.19■■■■□ 3.06
RIMBP3Q9UFD9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC34.19■■■■□ 3.06
RIMBP3Q9UFD9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC34.19■■■■□ 3.06
RIMBP3Q9UFD9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC34.19■■■■□ 3.06
RIMBP3Q9UFD9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC34.18■■■■□ 3.06
RIMBP3Q9UFD9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
RIMBP3Q9UFD9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
RIMBP3Q9UFD9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC34.18■■■■□ 3.06
RIMBP3Q9UFD9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC34.18■■■■□ 3.06
RIMBP3Q9UFD9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC34.18■■■■□ 3.06
RIMBP3Q9UFD9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
RIMBP3Q9UFD9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
RIMBP3Q9UFD9 AC087388.1-201ENST00000571370 1112 ntBASIC34.18■■■■□ 3.06
RIMBP3Q9UFD9 KRT16P2-201ENST00000414673 1423 ntBASIC34.17■■■■□ 3.06
RIMBP3Q9UFD9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC34.17■■■■□ 3.06
RIMBP3Q9UFD9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
RIMBP3Q9UFD9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC34.17■■■■□ 3.06
RIMBP3Q9UFD9 KRT126P-201ENST00000549467 1181 ntBASIC34.17■■■■□ 3.06
RIMBP3Q9UFD9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC34.17■■■■□ 3.06
RIMBP3Q9UFD9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC34.17■■■■□ 3.06
RIMBP3Q9UFD9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 UPK3BP1-201ENST00000428678 509 ntBASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 DUT-205ENST00000558813 769 ntTSL 2 BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 AC142086.6-201ENST00000621154 1765 ntBASIC34.16■■■■□ 3.06
RIMBP3Q9UFD9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC34.15■■■■□ 3.06
RIMBP3Q9UFD9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC34.14■■■■□ 3.06
RIMBP3Q9UFD9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC34.14■■■■□ 3.06
RIMBP3Q9UFD9 AC110285.5-201ENST00000611501 352 ntBASIC34.14■■■■□ 3.06
RIMBP3Q9UFD9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
RIMBP3Q9UFD9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 AP004607.7-201ENST00000527152 1677 ntBASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 OR7E47P-201ENST00000546390 1422 ntBASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 AC073508.3-201ENST00000619697 1419 ntBASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 AC008175.2-201ENST00000612840 297 ntBASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC34.13■■■■□ 3.05
RIMBP3Q9UFD9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 KRASP1-201ENST00000407852 552 ntBASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 AC100791.3-201ENST00000617619 330 ntBASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC34.12■■■■□ 3.05
RIMBP3Q9UFD9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC34.11■■■■□ 3.05
RIMBP3Q9UFD9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
RIMBP3Q9UFD9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC34.11■■■■□ 3.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms