Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 AC007322.1-201ENST00000426983 750 ntBASIC19.88■□□□□ 0.77
CTSFQ9UBX1 CNN2P6-201ENST00000439038 900 ntBASIC19.88■□□□□ 0.77
CTSFQ9UBX1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSFQ9UBX1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSFQ9UBX1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSFQ9UBX1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.87■□□□□ 0.77
CTSFQ9UBX1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSFQ9UBX1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.87■□□□□ 0.77
CTSFQ9UBX1 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.87■□□□□ 0.77
CTSFQ9UBX1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.87■□□□□ 0.77
CTSFQ9UBX1 AL050303.2-201ENST00000619798 666 ntBASIC19.87■□□□□ 0.77
CTSFQ9UBX1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSFQ9UBX1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSFQ9UBX1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.87■□□□□ 0.77
CTSFQ9UBX1 AC061975.6-201ENST00000579045 1553 ntBASIC19.87■□□□□ 0.77
CTSFQ9UBX1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 POU5F1P4-201ENST00000413175 1085 ntBASIC19.86■□□□□ 0.77
CTSFQ9UBX1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 SLC7A5P1-201ENST00000568957 537 ntBASIC19.86■□□□□ 0.77
CTSFQ9UBX1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 AC005181.1-201ENST00000604782 1256 ntBASIC19.86■□□□□ 0.77
CTSFQ9UBX1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.86■□□□□ 0.77
CTSFQ9UBX1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 AC120498.10-201ENST00000621827 505 ntBASIC19.86■□□□□ 0.77
CTSFQ9UBX1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSFQ9UBX1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CTSFQ9UBX1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.85■□□□□ 0.77
CTSFQ9UBX1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.85■□□□□ 0.77
CTSFQ9UBX1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTSFQ9UBX1 NCF1B-203ENST00000435988 1254 ntBASIC19.85■□□□□ 0.77
CTSFQ9UBX1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTSFQ9UBX1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.85■□□□□ 0.77
CTSFQ9UBX1 AC104771.1-201ENST00000603335 964 ntBASIC19.85■□□□□ 0.77
CTSFQ9UBX1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTSFQ9UBX1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTSFQ9UBX1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTSFQ9UBX1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.84■□□□□ 0.77
CTSFQ9UBX1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 TERF1P5-201ENST00000477545 1207 ntBASIC19.83■□□□□ 0.77
CTSFQ9UBX1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.83■□□□□ 0.77
CTSFQ9UBX1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTSFQ9UBX1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTSFQ9UBX1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTSFQ9UBX1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTSFQ9UBX1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms