Protein–RNA interactions for Protein: Q9NYB5

SLCO1C1, Solute carrier organic anion transporter family member 1C1, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO1C1Q9NYB5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLCO1C1Q9NYB5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.82■□□□□ 0.6
SLCO1C1Q9NYB5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLCO1C1Q9NYB5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 AL157384.1-201ENST00000445995 2473 ntBASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 AC105265.2-201ENST00000467189 838 ntBASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.81■□□□□ 0.6
SLCO1C1Q9NYB5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLCO1C1Q9NYB5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 IGHV3-19-201ENST00000521488 291 ntBASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 AC007952.6-201ENST00000573168 2673 ntBASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 AC003957.1-201ENST00000625108 2673 ntBASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLCO1C1Q9NYB5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLCO1C1Q9NYB5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLCO1C1Q9NYB5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLCO1C1Q9NYB5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.77■□□□□ 0.59
SLCO1C1Q9NYB5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLCO1C1Q9NYB5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.77■□□□□ 0.59
SLCO1C1Q9NYB5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.77■□□□□ 0.59
SLCO1C1Q9NYB5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 AP004607.7-201ENST00000527152 1677 ntBASIC18.76■□□□□ 0.59
SLCO1C1Q9NYB5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLCO1C1Q9NYB5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLCO1C1Q9NYB5 TSPY26P-201ENST00000476365 1326 ntBASIC18.75■□□□□ 0.59
SLCO1C1Q9NYB5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SLCO1C1Q9NYB5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLCO1C1Q9NYB5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLCO1C1Q9NYB5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms