Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 DUSP5P2-201ENST00000426873 1033 ntBASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 AC097658.1-201ENST00000475555 843 ntBASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 AC093827.2-201ENST00000512654 315 ntBASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 AL162412.1-201ENST00000567129 965 ntBASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 AC243732.1-201ENST00000612648 864 ntBASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HCFC1R1Q9NWW0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.02■■□□□ 1.11
HCFC1R1Q9NWW0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
HCFC1R1Q9NWW0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 AC080038.3-201ENST00000623346 1952 ntBASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 AC091874.3-201ENST00000512672 1195 ntBASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 AC092053.2-201ENST00000640557 1818 ntBASIC22.01■■□□□ 1.11
HCFC1R1Q9NWW0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 C9orf163-202ENST00000624034 2573 ntBASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 OR2A1-AS1-201ENST00000462305 773 ntBASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC1R1Q9NWW0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 C1orf229-201ENST00000623686 2258 ntBASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
HCFC1R1Q9NWW0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC1R1Q9NWW0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 ESRRAP1-201ENST00000400596 1257 ntBASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 RPS2P52-201ENST00000469610 820 ntBASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
HCFC1R1Q9NWW0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC1R1Q9NWW0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms