Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF304Q9HCX3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF304Q9HCX3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF304Q9HCX3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF304Q9HCX3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20■□□□□ 0.79
ZNF304Q9HCX3 MFSD11-216ENST00000590393 1141 ntBASIC20■□□□□ 0.79
ZNF304Q9HCX3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20■□□□□ 0.79
ZNF304Q9HCX3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF304Q9HCX3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF304Q9HCX3 AL024507.2-201ENST00000606070 2574 ntBASIC20■□□□□ 0.79
ZNF304Q9HCX3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF304Q9HCX3 AC026471.6-201ENST00000622954 1905 ntBASIC20■□□□□ 0.79
ZNF304Q9HCX3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20■□□□□ 0.79
ZNF304Q9HCX3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 AC026185.1-201ENST00000445748 174 ntBASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 AC120498.10-201ENST00000621827 505 ntBASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF304Q9HCX3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF304Q9HCX3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 POU5F1P4-201ENST00000413175 1085 ntBASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 SLC7A5P2-201ENST00000553010 536 ntBASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 RAP2CP1-201ENST00000605103 478 ntBASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF304Q9HCX3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 AC133561.1-201ENST00000568600 2415 ntBASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 AC010542.4-201ENST00000563151 1910 ntBASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF304Q9HCX3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
ZNF304Q9HCX3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms