Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 AC083906.2-201ENST00000511578 360 ntBASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 AC231657.2-201ENST00000624556 255 ntBASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
POLR1BQ9H9Y6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
POLR1BQ9H9Y6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
POLR1BQ9H9Y6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 TSPY6P-201ENST00000448518 926 ntBASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 TSPY20P-201ENST00000450910 630 ntBASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.75■□□□□ 0.91
POLR1BQ9H9Y6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 AL050303.2-201ENST00000619798 666 ntBASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 AC066615.1-201ENST00000640911 628 ntBASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
POLR1BQ9H9Y6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 AC007322.1-201ENST00000426983 750 ntBASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 KRT18P6-201ENST00000555540 1265 ntBASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 AC104187.1-201ENST00000607510 612 ntBASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.73■□□□□ 0.91
POLR1BQ9H9Y6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 AC079630.1-202ENST00000618127 1840 ntBASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 KRT87P-202ENST00000534226 1464 ntBASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR1BQ9H9Y6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
POLR1BQ9H9Y6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms