Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
CDC42EP4Q9H3Q1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CDC42EP4Q9H3Q1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDC42EP4Q9H3Q1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 KRT16P3-201ENST00000439127 1283 ntBASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 AP006587.3-201ENST00000525742 1516 ntBASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42EP4Q9H3Q1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42EP4Q9H3Q1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 AL391422.3-201ENST00000603791 2761 ntBASIC21.42■■□□□ 1.02
CDC42EP4Q9H3Q1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CDC42EP4Q9H3Q1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42EP4Q9H3Q1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42EP4Q9H3Q1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms