Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN3Q9H347 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN3Q9H347 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
UBQLN3Q9H347 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
UBQLN3Q9H347 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
UBQLN3Q9H347 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.52■□□□□ 0.72
UBQLN3Q9H347 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
UBQLN3Q9H347 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
UBQLN3Q9H347 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBQLN3Q9H347 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 AL034346.1-201ENST00000568244 1277 ntBASIC19.51■□□□□ 0.71
UBQLN3Q9H347 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 AC055733.4-201ENST00000638462 1354 ntBASIC19.51■□□□□ 0.71
UBQLN3Q9H347 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UBQLN3Q9H347 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 AP004607.4-201ENST00000530158 1459 ntBASIC19.5■□□□□ 0.71
UBQLN3Q9H347 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.5■□□□□ 0.71
UBQLN3Q9H347 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN3Q9H347 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.49■□□□□ 0.71
UBQLN3Q9H347 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN3Q9H347 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UBQLN3Q9H347 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBQLN3Q9H347 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.49■□□□□ 0.71
UBQLN3Q9H347 AC079140.4-201ENST00000507448 529 ntBASIC19.49■□□□□ 0.71
UBQLN3Q9H347 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.49■□□□□ 0.71
UBQLN3Q9H347 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.49■□□□□ 0.71
UBQLN3Q9H347 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.49■□□□□ 0.71
UBQLN3Q9H347 AC004854.2-201ENST00000608450 1441 ntBASIC19.49■□□□□ 0.71
UBQLN3Q9H347 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 Z98882.1-201ENST00000622160 2253 ntBASIC19.48■□□□□ 0.71
UBQLN3Q9H347 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBQLN3Q9H347 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.47■□□□□ 0.71
UBQLN3Q9H347 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 AC092437.1-201ENST00000624794 1048 ntBASIC19.47■□□□□ 0.71
UBQLN3Q9H347 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.47■□□□□ 0.71
UBQLN3Q9H347 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms