Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AC026471.6-201ENST00000622954 1905 ntBASIC21.18■□□□□ 0.98
CLPBQ9H078 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLPBQ9H078 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLPBQ9H078 ID1-201ENST00000376105 1233 ntBASIC21.18■□□□□ 0.98
CLPBQ9H078 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLPBQ9H078 CDCA4P2-201ENST00000441182 718 ntBASIC21.18■□□□□ 0.98
CLPBQ9H078 RAP2CP1-201ENST00000605103 478 ntBASIC21.18■□□□□ 0.98
CLPBQ9H078 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.18■□□□□ 0.98
CLPBQ9H078 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLPBQ9H078 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLPBQ9H078 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CLPBQ9H078 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.18■□□□□ 0.98
CLPBQ9H078 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLPBQ9H078 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLPBQ9H078 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLPBQ9H078 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLPBQ9H078 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLPBQ9H078 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CLPBQ9H078 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.17■□□□□ 0.98
CLPBQ9H078 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.17■□□□□ 0.98
CLPBQ9H078 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.17■□□□□ 0.98
CLPBQ9H078 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.17■□□□□ 0.98
CLPBQ9H078 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLPBQ9H078 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.17■□□□□ 0.98
CLPBQ9H078 AC073111.5-205ENST00000641717 521 ntBASIC21.17■□□□□ 0.98
CLPBQ9H078 AC009237.3-201ENST00000393279 1427 ntBASIC21.17■□□□□ 0.98
CLPBQ9H078 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLPBQ9H078 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
CLPBQ9H078 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.17■□□□□ 0.98
CLPBQ9H078 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLPBQ9H078 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLPBQ9H078 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLPBQ9H078 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 AP006587.3-201ENST00000525742 1516 ntBASIC21.16■□□□□ 0.98
CLPBQ9H078 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.16■□□□□ 0.98
CLPBQ9H078 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLPBQ9H078 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.16■□□□□ 0.98
CLPBQ9H078 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.16■□□□□ 0.98
CLPBQ9H078 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLPBQ9H078 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.16■□□□□ 0.98
CLPBQ9H078 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.16■□□□□ 0.98
CLPBQ9H078 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.16■□□□□ 0.98
CLPBQ9H078 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.16■□□□□ 0.98
CLPBQ9H078 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.15■□□□□ 0.98
CLPBQ9H078 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.15■□□□□ 0.98
CLPBQ9H078 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.15■□□□□ 0.98
CLPBQ9H078 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CLPBQ9H078 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.15■□□□□ 0.98
CLPBQ9H078 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLPBQ9H078 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLPBQ9H078 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.14■□□□□ 0.98
CLPBQ9H078 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLPBQ9H078 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.14■□□□□ 0.97
CLPBQ9H078 BID-214ENST00000617586 542 ntTSL 5 BASIC21.14■□□□□ 0.97
CLPBQ9H078 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CLPBQ9H078 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.14■□□□□ 0.97
CLPBQ9H078 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLPBQ9H078 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.13■□□□□ 0.97
CLPBQ9H078 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLPBQ9H078 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLPBQ9H078 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLPBQ9H078 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CLPBQ9H078 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.13■□□□□ 0.97
CLPBQ9H078 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CLPBQ9H078 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLPBQ9H078 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CLPBQ9H078 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CLPBQ9H078 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLPBQ9H078 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLPBQ9H078 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms