Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 NTF6B-201ENST00000591913 560 ntBASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3Q9BZ76 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 AC087388.1-201ENST00000571370 1112 ntBASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 AC005363.2-201ENST00000618631 242 ntBASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP3Q9BZ76 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 AC005521.1-201ENST00000393351 872 ntBASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 MIR6089-201ENST00000616698 64 ntBASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 AC113410.3-201ENST00000623366 203 ntBASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3Q9BZ76 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CNTNAP3Q9BZ76 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 AC144652.1-201ENST00000609974 1624 ntBASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 PNMA6B-201ENST00000538162 1200 ntBASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP3Q9BZ76 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 AC142381.3-201ENST00000568208 1670 ntBASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP3Q9BZ76 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 AC006557.6-201ENST00000623071 864 ntBASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms