Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22■■□□□ 1.11
TRIM62Q9BVG3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM62Q9BVG3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22■■□□□ 1.11
TRIM62Q9BVG3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
TRIM62Q9BVG3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22■■□□□ 1.11
TRIM62Q9BVG3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM62Q9BVG3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM62Q9BVG3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
TRIM62Q9BVG3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM62Q9BVG3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM62Q9BVG3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM62Q9BVG3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM62Q9BVG3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22■■□□□ 1.11
TRIM62Q9BVG3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.99■■□□□ 1.11
TRIM62Q9BVG3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 FBXW4P1-201ENST00000426721 2239 ntBASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 AC006015.1-201ENST00000429970 570 ntBASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM62Q9BVG3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 PKD1P6-201ENST00000343738 4769 ntBASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM62Q9BVG3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 AL137784.2-201ENST00000607332 1000 ntBASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM62Q9BVG3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM62Q9BVG3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM62Q9BVG3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM62Q9BVG3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM62Q9BVG3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM62Q9BVG3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM62Q9BVG3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms