Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXC2Q99958 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
FOXC2Q99958 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXC2Q99958 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXC2Q99958 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
FOXC2Q99958 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXC2Q99958 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXC2Q99958 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXC2Q99958 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXC2Q99958 RN7SL471P-201ENST00000580476 299 ntBASIC17.81■□□□□ 0.44
FOXC2Q99958 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXC2Q99958 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXC2Q99958 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXC2Q99958 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXC2Q99958 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXC2Q99958 KRT16P2-201ENST00000414673 1423 ntBASIC17.81■□□□□ 0.44
FOXC2Q99958 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FOXC2Q99958 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXC2Q99958 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXC2Q99958 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXC2Q99958 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXC2Q99958 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXC2Q99958 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXC2Q99958 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXC2Q99958 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXC2Q99958 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXC2Q99958 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXC2Q99958 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
FOXC2Q99958 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
FOXC2Q99958 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXC2Q99958 BX088651.1-201ENST00000540551 451 ntBASIC17.79■□□□□ 0.44
FOXC2Q99958 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXC2Q99958 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXC2Q99958 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXC2Q99958 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXC2Q99958 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXC2Q99958 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
FOXC2Q99958 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXC2Q99958 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXC2Q99958 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXC2Q99958 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXC2Q99958 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXC2Q99958 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXC2Q99958 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXC2Q99958 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
FOXC2Q99958 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXC2Q99958 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXC2Q99958 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.78■□□□□ 0.44
FOXC2Q99958 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXC2Q99958 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
FOXC2Q99958 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
FOXC2Q99958 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXC2Q99958 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXC2Q99958 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXC2Q99958 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXC2Q99958 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXC2Q99958 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXC2Q99958 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXC2Q99958 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 AP006587.3-201ENST00000525742 1516 ntBASIC17.77■□□□□ 0.44
FOXC2Q99958 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
FOXC2Q99958 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXC2Q99958 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXC2Q99958 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXC2Q99958 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXC2Q99958 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.77■□□□□ 0.44
FOXC2Q99958 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXC2Q99958 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
FOXC2Q99958 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXC2Q99958 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXC2Q99958 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms