Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.66■■□□□ 1.22
CASD1Q96PB1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CASD1Q96PB1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CASD1Q96PB1 PRORSD1P-201ENST00000295112 541 ntBASIC22.65■■□□□ 1.22
CASD1Q96PB1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CASD1Q96PB1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.65■■□□□ 1.22
CASD1Q96PB1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
CASD1Q96PB1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.65■■□□□ 1.22
CASD1Q96PB1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.65■■□□□ 1.22
CASD1Q96PB1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.65■■□□□ 1.22
CASD1Q96PB1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CASD1Q96PB1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CASD1Q96PB1 AC080038.3-201ENST00000623346 1952 ntBASIC22.65■■□□□ 1.22
CASD1Q96PB1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CASD1Q96PB1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CASD1Q96PB1 AC026471.6-201ENST00000622954 1905 ntBASIC22.65■■□□□ 1.22
CASD1Q96PB1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASD1Q96PB1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASD1Q96PB1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.64■■□□□ 1.22
CASD1Q96PB1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CASD1Q96PB1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.64■■□□□ 1.22
CASD1Q96PB1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
CASD1Q96PB1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.64■■□□□ 1.22
CASD1Q96PB1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CASD1Q96PB1 DUSP5P2-201ENST00000426873 1033 ntBASIC22.64■■□□□ 1.21
CASD1Q96PB1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.64■■□□□ 1.21
CASD1Q96PB1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASD1Q96PB1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.64■■□□□ 1.21
CASD1Q96PB1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CASD1Q96PB1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASD1Q96PB1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CASD1Q96PB1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CASD1Q96PB1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.63■■□□□ 1.21
CASD1Q96PB1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CASD1Q96PB1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.63■■□□□ 1.21
CASD1Q96PB1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.63■■□□□ 1.21
CASD1Q96PB1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.63■■□□□ 1.21
CASD1Q96PB1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CASD1Q96PB1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 AC091799.1-201ENST00000422823 811 ntBASIC22.62■■□□□ 1.21
CASD1Q96PB1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.62■■□□□ 1.21
CASD1Q96PB1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CASD1Q96PB1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CASD1Q96PB1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CASD1Q96PB1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.61■■□□□ 1.21
CASD1Q96PB1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CASD1Q96PB1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CASD1Q96PB1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CASD1Q96PB1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CASD1Q96PB1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.61■■□□□ 1.21
CASD1Q96PB1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CASD1Q96PB1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CASD1Q96PB1 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.61■■□□□ 1.21
CASD1Q96PB1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CASD1Q96PB1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CASD1Q96PB1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CASD1Q96PB1 AC127496.7-201ENST00000625110 1798 ntBASIC22.61■■□□□ 1.21
CASD1Q96PB1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CASD1Q96PB1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.6■■□□□ 1.21
CASD1Q96PB1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.6■■□□□ 1.21
CASD1Q96PB1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CASD1Q96PB1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms